Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00669 ATGGGAGGGTACTCTACGAACCCCGCGGACTACAAGCTTCTAGAAGAAATTGGTTATGGCGCCACAGCCACGGTGTACAGAGCGATGTATCTCCCCTTCAACCAACTCGTGGCCATCAAGTCCCTGGATCTCGATCGTTGCAACATCAATCTCGACGACCTGCGTAGGGAGGCCCAAACCATGAGCCTCATCGACCACCCCAACGTGGTGAGGGCCCACTGCTCCTTTGCCGTGGAGCGGAGCCTCTGGGTGGTCATGCCCTTTATGGACCAGGGCTCCTGCCTCCACCTCATCAAGATTGCTCTCTCCCACGGCTTCCAAGAGGACGCTATCGGATCCATCCTCAAGGAGACTCTCAAGGCCCTCCACTACCTTCACCGCCACGGCCACATTCACCGCGACGTCAAGGCCGGCAACATTCTACTCGACACCTCCGGCGCTGTCAAACTCTCCGACTTCGGCGTCGCCACTTGCTTGTACGACGCCGTCGACAGGCAGCGTTGCAGAAATACTTTTGTTGGGACCCCTTGCTGGATGGCTCCTGAGGTGCTGCAACCAGCTGGAAGTGGCTATAATTCCAAGGCTGATATTTGGTCTTTTGGGATTACGGCACTTGAGTTGGCTCATGGCCATGCACCATTTTCAAAATATCCTCCAATGAAGGTTCTTCTAATGACAATGCAGAATGCCCCTCCTGGACTTGATGATCGAGATAAAAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTGAAAGATCAAACAAAAAGGCCATCAGCAGAGAAGTTACTGAAACATTCCTTCTTCAAACATGCTAAGCCTCCCGAGCTCTCTGTAAAGAAATTGTTTGCTGACTTACCTCCTCTTTGGAACTGTGTAAAATCCCTCAAGCTCAAAGATGCAGCACAACTAGCAGTGAAGAAAATGCCTTCTGCAGATGAAGAGGCAATATCTCAGAGTCAATATCAACGAGGAGTTAGTGCGTGGAACTTTGATATTGATGATTTGAAAGCTCAAGCTTCATTGGTGATGGATGATAATGATAATGCAGAGATGAGGGAAGATGAAAACAAATTTTTCACTAATTACAAGGCTAGTGCAATTGATTCCCAGTCTGGTACTGTCAAAATGAATACAGAGAAATCACCACAGAATAAAATCACATCACTGGTAGGTGCTTTTGACATAAAACAGACTGAGCAAAATGAATACTTGAACAAAAAGGAGAAGAATCTTGAAAGTGATCTCCAGGAACCTGGATTGCCCAGAAATATTATTTGGAAGAGAAATGGGTCAATTATGGAGGCAACAACATCCACTATAGAGAAAGATATAGGTATGAGCCATCAAACCCAAAGTGGGTTACCAGGCACAGTTCTCAGTCATTCTGCATCAGAAAGGAGACGAACATTAGAAAGGCTTGAGAATGGAAATCAGTTATTGGGCGAGAAAAATAACCGTGAAGCGCGACAACCTCCAAGTTTTAGTGGTCCATTGATGCTTCCGACGCGAGCTTCAGCAAATAGTTTATCAGCTCCAATAAAGTCTTCTGGAGGATTCAGAGATTCCTTGGATGACAAGTCTAAGGCTACTCTTGTGCAAATTAAAGGGCGATTCTCTGTAACATCAGAAAATTTAGATCTTGTGAAGGATATTCCTGTAAGTTCAGTTTCACGCCAATCTTCACAGGGATCAGTATCACCACTGCGGAAATCTGCCAGTGTTAGTGATTGGATGTTGGATTCCAAACAAATGGCCACTGAAGATTCTGCCACCGACAGTATCTCTGCATCACTTCTTACGACTCACCTTCAAAATCTTTTACAGCAAACATCTATTCAACAGGATCTTATAATGAATCTGTTAAATAGTGTGCAATCTGCTGAAGCAATTGAAGTTTCTCAGAATGGAAAGCTGCCACCATTACCTCGCAGTTCAGAAATCAATGGAAGTGTTGATACAGCAGCTTCAGAGAGGGAACGTCTTCTGCTGCTCAAAATTTTAGAGCTTCAGACTCGGATAATCACTTTGACTGATGAGCTGACTGCTGAGAAGTTAAAATACATGCAGTTGCAACAACAGCTAACTCTCTACAGTCAGGAACAAAATATGGACAAGAGAGAGGAAATTGCATGA 2145 0.4513 MGGYSTNPADYKLLEEIGYGATATVYRAMYLPFNQLVAIKSLDLDRCNINLDDLRREAQTMSLIDHPNVVRAHCSFAVERSLWVVMPFMDQGSCLHLIKIALSHGFQEDAIGSILKETLKALHYLHRHGHIHRDVKAGNILLDTSGAVKLSDFGVATCLYDAVDRQRCRNTFVGTPCWMAPEVLQPAGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTMQNAPPGLDDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKHAKPPELSVKKLFADLPPLWNCVKSLKLKDAAQLAVKKMPSADEEAISQSQYQRGVSAWNFDIDDLKAQASLVMDDNDNAEMREDENKFFTNYKASAIDSQSGTVKMNTEKSPQNKITSLVGAFDIKQTEQNEYLNKKEKNLESDLQEPGLPRNIIWKRNGSIMEATTSTIEKDIGMSHQTQSGLPGTVLSHSASERRRTLERLENGNQLLGEKNNREARQPPSFSGPLMLPTRASANSLSAPIKSSGGFRDSLDDKSKATLVQIKGRFSVTSENLDLVKDIPVSSVSRQSSQGSVSPLRKSASVSDWMLDSKQMATEDSATDSISASLLTTHLQNLLQQTSIQQDLIMNLLNSVQSAEAIEVSQNGKLPPLPRSSEINGSVDTAASERERLLLLKILELQTRIITLTDELTAEKLKYMQLQQQLTLYSQEQNMDKREEIA 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00669 714 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Gma20g00669 714 SMART serkin_6 11 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00669 714 Gene3D Transferase(Phosphotransferase) domain 1 92 319 - -
Gma20g00669 714 Pfam Protein kinase domain 11 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00669 714 CDD STKc_OSR1_SPAK 10 272 - -
Gma20g00669 714 MobiDBLite consensus disorder prediction 451 506 - -
Gma20g00669 714 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 3 705 - -
Gma20g00669 714 Coils Coil 336 356 - -
Gma20g00669 714 SUPERFAMILY Protein kinase-like (PK-like) 8 323 IPR011009 -
Gma20g00669 714 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Gma20g00669 714 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 705 - -
Gma20g00669 714 ProSiteProfiles Protein kinase domain profile. 11 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00669 714 MobiDBLite consensus disorder prediction 451 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00669 Gma-Chr20 25967667 25975259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00669 3 702 MAP Kinase Kinase Kinase Kinase AT4G24100 62.605 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gma20g00669 Pkinase 3.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00669 - - gmx:100793223 1375.92