Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00654 ATGGCGTCGTTGAAGGTGGCGCTACTGGCGCTGTTCTCCGTCGCGCTCATGTTCTCTCCGTCGCAGTCCGCGGTCTTCAGCGTCGATCTAGGTTCCGAATCGGTGAAAGTGGCGGTGGTGAACCTGAAGCCCGGCCAATCCCCGATCTGCATTGCGATCAACGAGATGTCCAAGCGCAAATCCCCGGCGCTGGTCTCCTTCCACGACGGCGACCGCCTCCTCGGTGAGGAGGCCGCCGGCCTCGCCGCGCGCTACCCGCAGAAGGTCTATTCCCAAATGCGCGACCTCATCGCCAAACCCTACGCCTCCGGGCAGAGGATTCTCAACTCAATGTACCTTCCCTTCCAGACCAAGGAAGATTCACGAGGTGGCGTGAGTTTTCAAAGCGAAAACGACGACGCCGTTTACTCCCCCGAGGAGCTGGTGGCCATGGTGTTAGGTTATGCGGCTAATTTGGCAGAGTTTCACGCGAAGATTCCGATAAAGGACGCGGTGATCGCGGTGCCGCCGCACATGGGACAGGCGGAGCGGAGAGGGTTGCTTGCGGCGGCGCAGTTAGCGGGGATTAACGTTTTGTCTCTGATAAACGAGCATTCCGGCGCGGCGCTGCAGTACGGGATCGACAAGGACTTCTCGAACGAGTCTCGGCACGTGATCTTCTACGACATGGGCGCGAGCAGCAGCTACGCGGCGCTCGTGTACTTCTCAGCGTACAAGGGGAAGGAGTACGGGAAGAGCGTATCGGTGAATCAGTTTCAGGTGAAGGACGTGCGCTGGAACCCGGAGCTCGGTGGCCAGCATATGGAGCTTCGGTTGGTCGAGTATTTTGCGGATCAGTTCAATGCACATGTTGGAGGTGGAATCGATGTCCGGAAGTTCCCCAAGGCTATGGCTAAGTTGAAGAAACAGGTTAAAAGGACTAAAGAGATTCTTAGTGCTAACACAGCAGCTCCTATTTCAGTTGAATCGCTTCTTGATGACGTCGATTTCAGGAGCACAATAACCCGTGAGAAATTTGAAGAGCTCTGTGAAGACATTTGGGAAAAATCACTCTTACCTGTGAAAGAGGTGCTTGAGCATTCTGGCCTGTCATTGGAACAAATATATGCAGTGGAGTTGATTGGAGGTGCCACCAGAGTGCCAAAATTACAGGCTAAGCTTCAAGAATTCCTTGGGAGAAAAGAACTTGATAGGCATCTTGATGCTGATGAAGCAATAGTTCTTGGTGCAGCTCTGCATGCTGCAAATTTAAGTGATGGAATCAAATTGAACCGCAAACTAGGAATGGTTGATGGCTCCTTATATGGATTTGTGGTTGAGTTGAATGGCCCTGATCTTTTAAAAGACGAAAGCTCTAGGCAGATACTTGTACCACGAATGAAGAAAGTCCCGAGTAAGATGTTTAGATCCGTTAATCATAACAAAGATTTTGAAGTTTCACTAGCTTATGAAAGTGATAATTATTTGCCTCCTGGTGTTACCTCTCCTGAAATTGCTCAATACCAGATATCTGGTTTGACAGATGCAAGTCAGAAATACTCATCTCGGAATCTGTCATCCCCCATCAAGGCAAACATTCATTTTTCTCTTAGTAGAAGTGGAATTCTTTCTCTGGATCGGGCAGATGCTGTTATTGAAATAACAGAGTGGGTGGAAGTTCCTAGGAAGAATTTGACCATAGAGAATTCAACCATTTCATCAAATGTTTCGGCTGAATCTGCTGCTGGTAATAGTACTGAGGAAAACAACGAAAGCGTGCAAACTGATAGTGGGGTTAATAAGGCATCCAACATTAGTGCAGAGGAGCAAGCTGCCACTGAGCCTGCTACAGAGAAAAAGCTGAAAAGGCAGACTTTTAGGGTACCATTAAAGATAGTTGAGAAGATAACTGGATTTGGAATGTCTCTATCACAAGATTTTCTTGCTGAAGCCAAAAGAAAATTACAAGTACTAGATCAAAAAGATGCAGACAGAAAAAGAACAGCTGAGTTAAAGAATAATTTAGAAGGATATATATATACTACCAAGGAAAAGATTGAAACGCTTGAGGAGTTTGAAAAAGTTTCTACAAGTGAGGAACGCCAGTCCTTCATTGAGAAGCTTGATCAGGTGCAAGATTGGTTGTATACAGATGGTGAAGATGCCAATGCAACAGAGTTTCAAGAGCATCTAGATCAGTTAAAAGCTGTTGGAGATCCAATTTTCTTCAGGTTAAAAGAGCTTACAACTCGGCCAGCAGCAGTTGAGCATGCTCATAAGTACATTGATGAGTTGAAACAGATTGTTCAAGAGTGGAAAGCAAAGAAGCCTTGGCTTCCACAAGAAAGAGTAGACGAGGTCATAAAAAGTTCTGAAAAATTGAAGAATTGGTTGGATGAGAAAGAAGCTGAGCAAAAGAAGACTTCTGGATTCAGTAAGCCAGCATTTACATCTGAAGAAGTATATCTGAAGGTGCTTGATCTGCAAACCAAGGTTGCCAGTATTAATAGAATTCCCAAGCCCAAACCTAAGGTTCAGAAGCCTGTAAAGAACGAAACTGAGAGCAGCAGTGCGCAGAATACAGAGACTTCTGATTCTAACTCAGCTGATAGTTCCTCTTCAAGTGATTCATCTGCCAACAGTTCAGAAGGCACAAGCAAAGAGACGGTTACTGAGCAATCTGAAGGTCACGATGAGCTATGA 2682 0.4646 MASLKVALLALFSVALMFSPSQSAVFSVDLGSESVKVAVVNLKPGQSPICIAINEMSKRKSPALVSFHDGDRLLGEEAAGLAARYPQKVYSQMRDLIAKPYASGQRILNSMYLPFQTKEDSRGGVSFQSENDDAVYSPEELVAMVLGYAANLAEFHAKIPIKDAVIAVPPHMGQAERRGLLAAAQLAGINVLSLINEHSGAALQYGIDKDFSNESRHVIFYDMGASSSYAALVYFSAYKGKEYGKSVSVNQFQVKDVRWNPELGGQHMELRLVEYFADQFNAHVGGGIDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLLDDVDFRSTITREKFEELCEDIWEKSLLPVKEVLEHSGLSLEQIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMVDGSLYGFVVELNGPDLLKDESSRQILVPRMKKVPSKMFRSVNHNKDFEVSLAYESDNYLPPGVTSPEIAQYQISGLTDASQKYSSRNLSSPIKANIHFSLSRSGILSLDRADAVIEITEWVEVPRKNLTIENSTISSNVSAESAAGNSTEENNESVQTDSGVNKASNISAEEQAATEPATEKKLKRQTFRVPLKIVEKITGFGMSLSQDFLAEAKRKLQVLDQKDADRKRTAELKNNLEGYIYTTKEKIETLEEFEKVSTSEERQSFIEKLDQVQDWLYTDGEDANATEFQEHLDQLKAVGDPIFFRLKELTTRPAAVEHAHKYIDELKQIVQEWKAKKPWLPQERVDEVIKSSEKLKNWLDEKEAEQKKTSGFSKPAFTSEEVYLKVLDLQTKVASINRIPKPKPKVQKPVKNETESSSAQNTETSDSNSADSSSSSDSSANSSEGTSKETVTEQSEGHDEL 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00654 893 Gene3D - 210 397 - -
Gma20g00654 893 SUPERFAMILY Actin-like ATPase domain 25 209 IPR043129 -
Gma20g00654 893 PRINTS 70kDa heat shock protein signature 24 37 - -
Gma20g00654 893 PRINTS 70kDa heat shock protein signature 56 68 - -
Gma20g00654 893 PRINTS 70kDa heat shock protein signature 164 184 - -
Gma20g00654 893 PRINTS 70kDa heat shock protein signature 368 384 - -
Gma20g00654 893 PRINTS 70kDa heat shock protein signature 400 420 - -
Gma20g00654 893 CDD HYOU1-like_NBD 27 415 - -
Gma20g00654 893 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 425 585 IPR029047 -
Gma20g00654 893 ProSitePatterns Heat shock hsp70 proteins family signature 3. 371 385 IPR018181 -
Gma20g00654 893 PANTHER HSC70CB, ISOFORM G-RELATED 11 827 - -
Gma20g00654 893 Pfam Hsp70 protein 26 736 IPR013126 GO:0005524|GO:0140662
Gma20g00654 893 Gene3D Actin; Chain A, domain 4 264 349 - -
Gma20g00654 893 Gene3D - 636 749 IPR029048 -
Gma20g00654 893 Gene3D - 91 144 - -
Gma20g00654 893 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 663 745 IPR029048 -
Gma20g00654 893 SUPERFAMILY Actin-like ATPase domain 215 417 IPR043129 -
Gma20g00654 893 MobiDBLite consensus disorder prediction 843 882 - -
Gma20g00654 893 MobiDBLite consensus disorder prediction 567 594 - -
Gma20g00654 893 MobiDBLite consensus disorder prediction 827 893 - -
Gma20g00654 893 Gene3D - 28 415 - -
Gma20g00654 893 PANTHER HEAT SHOCK 70 KDA PROTEIN 17 11 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00654 Gma-Chr20 25067382 25076261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00654 17 738 Calmodulin-binding Proteins AT3G12580 24.493 1.47e-58 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00654 K09486 - gmx:100788296 1685.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00654 20 25067382 25076261 Gma13g00041 13 1185583 1194939 GST