Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00645 ATGGATCACTCCTCTATTCATTTGTTGTCCCACCTTCACCTTCAGGCCTTGTGGACTTCTTTGATTATTATTGTAGTTTTTTGCATAACCTTTCTCAAAGGCTTTGGTCCTCACTTGTTTAAAAGAACCAAGAAACAAAAACTACCCTTACCCCCCGGTCCCAAACCATGGCCTATAATCGGTAACCTTCCTGAAATGGTTGCAAATAGGCCTACGTTCCGGTGGATACAAAAATTAATGAATGAAATGAACACCGAAATTGCATGTATCCAACTAGGAAATGTCCATGTTATTCCCGTGACTTGTCCCACCATTGCTTGTGAATTCTTGAGAAAACAAGATGCTAATTTTGCTTCTAGACCCACAAGCATGACCACTACTCTTATTAGTCGCGGATATCTCACCACAACCCTTGTACCCTTTGGGGAACAATGGAAGAAAATGAGGAGAATTGTTGGTAACGATTTGTTGTCCACCACCTCCCACCAACGACTTGAATATAAGAGGGTTGAGGAAGCCAACAACCTTGTATTTCACATCTACAACAATTGCAAAAACAATATTGCGAATGGTAATAATAATGTTGGCCTTGTGAACGTGAGAGATGTCGCACAACACTATTGTTGCAATGTGATGAAGAAATTGAACTTTAGTAGGAGGTACTTTGGGGAGGGTAAGAAGGATGGAGGGCCTGGTAGTGAGGAAGTGGAACATCTTGATGCCATTTTCACAATGCTTAAATACATTTATGACTTTAGAGTTTCTGACTATGTCCCTTGCTTGAGGGGACTTGACTTAGATGGTCATGAGGGCAAGGTGAAGAAGGCCATAGAAACTGTGGGCAAGTATCATGATCCCATCATTGAGCAGCGAATCAAAGAATGGGATGAAGGGTCCAAAATTCATGGAGAGGATTTCCTTGATATCCTTATCTCACTCAAAGATGCCAACAATAACCCGATGTTGACTACACAGGAAATCAAGGCACAAATCATAGAATTGATGATGGCAGGGGTGGACAACCCATCAAATGCAGTCGAATGGGGTCTTGCAGAGATGATAAACCAACCCAAGTTGCTTCAGCGCGCAACAGAAGAATTGGACAAGGTAGTGGGGAAAGAGAGACTGGTCCAAGAATCCGACATTTCAAAGCTCAACTACATAAAAGCATGTGCAAGAGAAGCTTTTCGTCTTCACCCTATTGTGCCTTTCAATGTTCCCCATGTCTCTATCAAAGACACAATAGTTGGAAACTACCTAATCCCAAAGGGTAGTCACATATTGTTAAGTAGACAAGAAATTGGGCGAAACCAAAAAGTTTGGGGTAACGAAGCTCACAAGTTCAAGCCAGAACGTCACCTGATAATGAATAAGAGTGAGGTTGTTGTTTTGACGGAGCCAGATTTGAAGTTTATTTCGTTCAGCACGGGACGACGTGGTTGTCCAGCTATCATGCTTGGTACCACAATGACTGTGATGCTATTTGCTAGGTTGCTTCAAGCCTTCACTTGGACTGCACCACCCAATGTGTCACGTATCAACCTTGCTGAGAACAATCATGATATTCTTCTTGGCCACCCACTTGTGGCACTAGCAAAACCAAGATTAACACCAGAGCTTTATGCCATGCACGACAAGTAG 1641 0.426 MDHSSIHLLSHLHLQALWTSLIIIVVFCITFLKGFGPHLFKRTKKQKLPLPPGPKPWPIIGNLPEMVANRPTFRWIQKLMNEMNTEIACIQLGNVHVIPVTCPTIACEFLRKQDANFASRPTSMTTTLISRGYLTTTLVPFGEQWKKMRRIVGNDLLSTTSHQRLEYKRVEEANNLVFHIYNNCKNNIANGNNNVGLVNVRDVAQHYCCNVMKKLNFSRRYFGEGKKDGGPGSEEVEHLDAIFTMLKYIYDFRVSDYVPCLRGLDLDGHEGKVKKAIETVGKYHDPIIEQRIKEWDEGSKIHGEDFLDILISLKDANNNPMLTTQEIKAQIIELMMAGVDNPSNAVEWGLAEMINQPKLLQRATEELDKVVGKERLVQESDISKLNYIKACAREAFRLHPIVPFNVPHVSIKDTIVGNYLIPKGSHILLSRQEIGRNQKVWGNEAHKFKPERHLIMNKSEVVVLTEPDLKFISFSTGRRGCPAIMLGTTMTVMLFARLLQAFTWTAPPNVSRINLAENNHDILLGHPLVALAKPRLTPELYAMHDK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00645 546 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 16 541 - -
Gma20g00645 546 Gene3D Cytochrome P450 38 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00645 546 Pfam Cytochrome P450 51 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00645 546 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Gma20g00645 546 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00645 546 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00645 546 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00645 546 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00645 546 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00645 546 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00645 546 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00645 546 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 16 541 - -
Gma20g00645 546 SUPERFAMILY Cytochrome P450 46 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00645 546 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00645 546 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma20g00645 546 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00645 Gma-Chr20 24752867 24755634 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00645 46 541 Cytochrome P450 AT5G05260 53.414 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00645 - K14984 gmx:100786887 1056.97