Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00628 ATGGATCTGGATCGCTGCAATAGAAATCTGGATGACATACAGAGGGAGGCGCAGATGATGAGCCTGATAGAGCACCCCAACGTGGTGAGGGCCTACTGCTCCTTCATGGTGAAGCGGAGCCTATGGGTGGTGATGGCATTCATGGCGCAGGGCTCCTGCCTGCATCTCATGAAGGCCGCTTATCCCGAGGGATTCAAAGAGGCCTCCATTGGATCTATCCTCAAAGAGACTCTCAAGGTGTTGGAGTATCTCCACCGACACGACCACATTCACCGCGACGTCAAGGCTAGGAATATTCACCTCGATGATAACGGCAAGGTCAAGCTCGCTGACTTCGGTGTCTCCACTTGCATGTTTGACACCGGCGACCACTAG 375 0.5387 MDLDRCNRNLDDIQREAQMMSLIEHPNVVRAYCSFMVKRSLWVVMAFMAQGSCLHLMKAAYPEGFKEASIGSILKETLKVLEYLHRHDHIHRDVKARNIHLDDNGKVKLADFGVSTCMFDTGDH 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00628 124 Gene3D Phosphorylase Kinase; domain 1 1 50 - -
Gma20g00628 124 Pfam Protein kinase domain 11 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00628 124 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00628 124 Gene3D Transferase(Phosphotransferase) domain 1 51 124 - -
Gma20g00628 124 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 123 - -
Gma20g00628 124 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1-LIKE ISOFORM X1 1 123 - -
Gma20g00628 124 SUPERFAMILY Protein kinase-like (PK-like) 8 120 IPR011009 -
Gma20g00628 124 SMART serkin_6 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00628 Gma-Chr20 22981624 22981998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00628 1 123 MAP Kinase Kinase Kinase Kinase AT4G10730 73.171 4.13e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gma20g00628 Pkinase 6.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00628 - - gmx:100783699 227.254