Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00596 ATGGGGTTTTTGCTCAAAGAGGCTTTAAGGACTCTGTTCTCAAGGAATCGCTGGTCTTATGCCATTTTCTGGAAGATTGGTTACAATAATTCCAAAGGTTGTTTCGTTTTTGTCCTGTTCGAGCTTTACGATCCAGCTATGGATAAGGACTCCTGTGGAGTGGGGTTCGTGGCGGAACTGTCCGGCGAAAGTAGCTGCAAAACAGTGACTAACGCTTTGGAGATGCCGGTGCGCATGACGCATAGAGGTGCTTGCGGTGTGAAGCCAACACTAGAGATGGAGCAGGGATCATGGTGGCTCTACCTCACCAGTTTTACAAAGAGTGAAATCGCTTCTCCATCGAGAGATACAAAGGTTTTTCCTATGACATCAACCCTAGGGAGTCCATTGGGTATGGCACGTAGAATTAGCTTAATTGGTGAGATTAATGATACAAAGGATACATGGAGACTTGCAATCAGAATTACAAAAATATGCTTCATTCAAAAGACTGCAGGAGGAGGTTTTTTGGAGATGATTTTAATGGATGAGAAGGGACATAAGATCAAGGCCACAGTTAACGTTTTAAATTTGACAGATGGAAAAATCAACTCAAAGAGAGGAAAACTTATATTGTTTAGAACTTTGAGTTTGTTGACATAA 642 0.4206 MGFLLKEALRTLFSRNRWSYAIFWKIGYNNSKGCFVFVLFELYDPAMDKDSCGVGFVAELSGESSCKTVTNALEMPVRMTHRGACGVKPTLEMEQGSWWLYLTSFTKSEIASPSRDTKVFPMTSTLGSPLGMARRISLIGEINDTKDTWRLAIRITKICFIQKTAGGGFLEMILMDEKGHKIKATVNVLNLTDGKINSKRGKLILFRTLSLLT 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00596 213 Gene3D - 133 210 IPR012340 -
Gma20g00596 213 Pfam Glutamine amidotransferases class-II 52 88 IPR017932 -
Gma20g00596 213 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 52 119 IPR029055 -
Gma20g00596 213 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 42 96 - -
Gma20g00596 213 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 52 89 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00596 Gma-Chr20 20755133 20759313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00596 1 79 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 34.940 2.81e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00596 K00264 - gmx:100809905 87.0409