Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00581 ATGGGCACAATAGTTTTTGATTTTGCAGCATTATCTTCAAGGGAATATGATATTAAATGCATAATTGACTTTCATGCTGCTCTTGGTTCCCAAAATGGGATGGAGCATAGTGCAAGCATAGATGGATTTACAGTGGATGAATTGGACAAAGAAATTTTTATAGCCTCTAAAGATCCTTCTTTGTATGGCATTGATGAAGTGGAGGTTAAAAACCAGAGGAAGTGGACCAGTGATACTCGCACCCAGGTGAGCACAACAAAGAAAGCAGTGCAAGCTGGAAAAGGCTTAAACAATGCTAGTCTAAATGGGATGCACAAGGAATTAATGAGGCTTCCTAGAATGATTGATATCAAAAAGTGTTGTAGAATGATTGAGCTTACTCAAGGCTGTTACGACATGACATGCTGGACAGATGCATTGAAGCTACTAGTAATTTTGAGGCGGCCTGTTCCTCGTGCCGTTGCAAGAGTAGGAGTCTGGCTTAACATATTTCAGTTTCTTATACTGATGTCTATATGCACCAACTGTGCTATTTTAGCATGGCTATATGATGAGGAGGGAAAATGGAAAATAGAGCCTGGACTTGCAGCAATTTTAATCATGGAGCATGTCCTCTTGTTGACTAAGTTCGGTTTCTCTCGCTTCTTTCCTAAGGTGATTGTTTTGCTTCCCAAAATGTCTGGGCCACAAGAGCAAAATTTGCATTCTCAAGGTGGAAGCGGCAATATGGTAATTGTTGTCCTTTGCAAACATGGAATTTTGTTTGAGCATATCATAATTGTCCTTACCCAGATTTTCAAGAGTGGACCACTTTTCATATCTTCCAAAGAATAA 834 0.3969 MGTIVFDFAALSSREYDIKCIIDFHAALGSQNGMEHSASIDGFTVDELDKEIFIASKDPSLYGIDEVEVKNQRKWTSDTRTQVSTTKKAVQAGKGLNNASLNGMHKELMRLPRMIDIKKCCRMIELTQGCYDMTCWTDALKLLVILRRPVPRAVARVGVWLNIFQFLILMSICTNCAILAWLYDEEGKWKIEPGLAAILIMEHVLLLTKFGFSRFFPKVIVLLPKMSGPQEQNLHSQGGSGNMVIVVLCKHGILFEHIIIVLTQIFKSGPLFISSKE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00581 277 Pfam Calcium-activated chloride channel 137 219 IPR007632 -
Gma20g00581 277 PANTHER NGEP-RELATED 133 218 IPR007632 -
Gma20g00581 277 Gene3D - 37 93 - -
Gma20g00581 277 PANTHER BNAC06G23840D PROTEIN 133 218 - -
Gma20g00581 277 SUPERFAMILY t-snare proteins 44 90 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00581 Gma-Chr20 19282794 19288202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00581 45 112 SNARE and Associated Proteins AT1G28490 53.521 1.79e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00581 K19327 - gmx:121173726 239.965