Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00571 ATGTTTTGCGTCGTGTATTGTTTTCTTAGTTTCCAACAATCAGAATTTCCAGCAAGTTTCCTTAATTTTACGTCTTCAAAGGAAAACATTCCACTTGAGGAAGTTTTTCAGACTCTGAGGTGTGATTCAGATGGACTCACAACAAAATTTGCTCAGGAGAGGCTGGTCATCTTTGGCCACAACAAACTTGAGGAGAAGAAGGAGAGCAAGGTTTTGAAGTTTTTAGGATTTATGTGGAATCCTCTTTCATGGGTCATGGAAGCTGCAACAATCATGGCCATTGCTTTGGCCAATGGAAGATAA 303 0.3993 MFCVVYCFLSFQQSEFPASFLNFTSSKENIPLEEVFQTLRCDSDGLTTKFAQERLVIFGHNKLEEKKESKVLKFLGFMWNPLSWVMEAATIMAIALANGR 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00571 100 PANTHER CALCIUM-TRANSPORTING ATPASE 21 99 - -
Gma20g00571 100 SMART Cation_ATPase_N_a_2 26 98 IPR004014 -
Gma20g00571 100 Pfam Cation transporter/ATPase, N-terminus 29 92 IPR004014 -
Gma20g00571 100 PANTHER PLASMA MEMBRANE ATPASE 1 21 99 - -
Gma20g00571 100 Gene3D - 77 100 - -
Gma20g00571 100 SUPERFAMILY Calcium ATPase, transmembrane domain M 28 97 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00571 Gma-Chr20 18692228 18693658 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00571 28 99 Primary Pumps ATPases AT3G60330 73.611 1.40e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00571 K01535 - gmx:100818268 139.043