Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00556 ATGGAATTTTCGCAGAGTCACAGGGTAGAGATGATAAGCATGGCAGTTGCTCTTGTTGCCATTGTTGGTGGCACCGCTTACTATTACTACGTCACCAAGAAGCCAAAAGGGTGCTTGGATCCTGAGAACTTCAAAGAATTTAAACTTGTTAAACGCACTCAACTCAGCCATAATGTTGCCACGTTCCGATTTGATCTTCCTACTCCTAAGTCAGTGTTGGGACTTCCTATTGGACAACATATCAGCTGCAGAGGGAAGGATAGTCTTGGTGAAGAAGTTGTGAAACCATATACTCCTACAACATTGGATACTGATGTTGGATACTTTGAATTGGTTGTGAAGATGTATCCACAAGGACGGATGTCTCATCACTTTAGGGAGATACGTGAAGGTGATTACATGGCTGTGAAGGGACCAAAGGGACGTTTTAAGTACCAGCCCAACCAAGTAAGAGCTTTGGGTATGATTGCTGGTGGCACTGGCATCACCCCAATGTTTCAAGTTACAAGAGCTATATTAGAAAACCAACAGGACAAAACCAACATAAATTTGATATATGCCAATGTCACATTTGATGACATTCTTTTGAAGGATTTACAAGCATGGCATCTAGCTTCTAAATATGTTGTCATTTTTGTTGTGAATAAATATACCATGCAGCCACCAGAAATATGGGACGGTGGTGTTGGATTCGTCACTAAGGAAATGATCCAAACAGATTTCCCTGCACCAGCATCAGATATTAAGATATTAAGGTGTGGACCACCTCCCATGAACAAGGCTATGGCTGCTAATCTTGAAGCTCTTGGATACAGTCCCCAAATGCAGTTTCAATTTGACAGAATAAGCGCGCCTGTGTTACACTCTAGGCTGTTTCACAATTTTGGCTCTCACCCCAAAACTCATTGA 909 0.4202 MEFSQSHRVEMISMAVALVAIVGGTAYYYYVTKKPKGCLDPENFKEFKLVKRTQLSHNVATFRFDLPTPKSVLGLPIGQHISCRGKDSLGEEVVKPYTPTTLDTDVGYFELVVKMYPQGRMSHHFREIREGDYMAVKGPKGRFKYQPNQVRALGMIAGGTGITPMFQVTRAILENQQDKTNINLIYANVTFDDILLKDLQAWHLASKYVVIFVVNKYTMQPPEIWDGGVGFVTKEMIQTDFPAPASDIKILRCGPPPMNKAMAANLEALGYSPQMQFQFDRISAPVLHSRLFHNFGSHPKTH 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00556 302 Pfam Oxidoreductase NAD-binding domain 155 262 IPR001433 GO:0016491
Gma20g00556 302 PRINTS Cytochrome B5 reductase signature 95 102 - -
Gma20g00556 302 PRINTS Cytochrome B5 reductase signature 131 145 - -
Gma20g00556 302 PRINTS Cytochrome B5 reductase signature 154 173 - -
Gma20g00556 302 PRINTS Cytochrome B5 reductase signature 191 202 - -
Gma20g00556 302 PRINTS Cytochrome B5 reductase signature 73 84 - -
Gma20g00556 302 PRINTS Cytochrome B5 reductase signature 249 257 - -
Gma20g00556 302 SUPERFAMILY Riboflavin synthase domain-like 35 148 IPR017938 -
Gma20g00556 302 Gene3D - 135 279 IPR039261 -
Gma20g00556 302 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 279 - -
Gma20g00556 302 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
Gma20g00556 302 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 135 274 IPR039261 -
Gma20g00556 302 CDD cyt_b5_reduct_like 47 279 - -
Gma20g00556 302 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
Gma20g00556 302 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 279 IPR001834 GO:0016491
Gma20g00556 302 Gene3D Translation factors 35 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00556 Gma-Chr20 14852113 14864694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00556 27 279 NADPH P450 reductases AT5G17770 75.494 5.72e-142 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00556 K00326 - gmx:100812559 523.857