Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00544 ATGGAAGGAAGAGGGATTTTGATGGAAGAGGAAACGATGCGAACGTCGCCGTTTCGAAGCATTGTGTTCTCCGTGTTTCATTTCATTGAGCAATTTGAATCGAGAGTGAATTCGCGCCACCATTGGAAAAAAAAGGTTCCCAGTGTTGGGGAGCCTAGGGTTAGGGTTTCTGAGACATGTGGGATGTTCCATGCATTCGTGAGCCTTATCGCACGCGGTTGGAAGCTGTTCGAGCACAGTGATGACGCCGGTAATGCCGCCGCCGCCATCGGAAGAGAATGCAAGGATGGCCTCCTCTGGTTCCACGACATCGGAAAGTTCGCTGCCGGCGATTCCTCCATGGCCGTCGTCCAGGCCAACCAGGTCTTCGAGGACCAGAGCCAGATCGAGTCCGGCGGCTTCAGCACCTTCATCGGCATCTACGACGGCCACGGCGGCCCCGATTGCTCCTGCTATGTCTGTGATAACTTGTTCCGCAATCTCCAAGAACTGTACAAGATGGTTTGCGAACCTGATGAAACTGATTTGAACATACGCATACCTGCTGTCATGCTTCCACTAGATGCAGGTACAAGGCTCGAAAAAATGTTGGCAACTACTTCATCTGTGTCTGTGCAGCTCTTGGACGACCGAGAAGCAGCTATTGAACAGGATAAGTTGCTAAAGGATGCTTCAGATGAACTCCCAAACACTAAATATGCTAGTGTTAGTGGAGTTGTAAATATGAATGTGAAAGCTACAGTCCTTTTTGTTGTATTTGCTTCGTGTTTCCTGTTTATGCTTTACAAACTGATGTCGTCGTGGTTCATTGATGTTTTGGTTGTTCTCTTCTGTATTGGTGGTATTGAGGGCTTGCAAACATGCTTGGTTGCTCTTTTGTCCAGGTGGTTCAAGCATGCTGGAGAGTCATACATCAAATTTATCGCAACGAATCCTTTGCCTGGATTGGTCAAGATATACTTGGAATAG 969 0.4799 MEGRGILMEEETMRTSPFRSIVFSVFHFIEQFESRVNSRHHWKKKVPSVGEPRVRVSETCGMFHAFVSLIARGWKLFEHSDDAGNAAAAIGRECKDGLLWFHDIGKFAAGDSSMAVVQANQVFEDQSQIESGGFSTFIGIYDGHGGPDCSCYVCDNLFRNLQELYKMVCEPDETDLNIRIPAVMLPLDAGTRLEKMLATTSSVSVQLLDDREAAIEQDKLLKDASDELPNTKYASVSGVVNMNVKATVLFVVFASCFLFMLYKLMSSWFIDVLVVLFCIGGIEGLQTCLVALLSRWFKHAGESYIKFIATNPLPGLVKIYLE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00544 322 Gene3D - 106 231 IPR036457 -
Gma20g00544 322 Pfam Signal peptide peptidase 239 301 IPR007369 GO:0004190|GO:0016021
Gma20g00544 322 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 2 159 208 - -
Gma20g00544 322 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 2 210 307 - -
Gma20g00544 322 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169
Gma20g00544 322 SUPERFAMILY PP2C-like 120 173 IPR036457 -
Gma20g00544 322 PANTHER SIGNAL PEPTIDE PEPTIDASE 159 208 IPR007369 GO:0004190|GO:0016021
Gma20g00544 322 PANTHER SIGNAL PEPTIDE PEPTIDASE 210 307 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00544 Gma-Chr20 13942648 13948521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00544 98 164 PP2C-type Phosphatase Gene Family AT3G17090 65.672 4.56e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00544 K09597 - gmx:100776907 494.197