Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00530 ATGGATGTTCAAGTGATAAATGTGGAAGTAAGTGGTCATCAAACTAAGGCAGATGATGGCGATGCAGAACCAAGTGACGGTGAAGTTAATAATGCTGAAAACTATGGATCTCATGTTGAGGATGAGATTTCTGAGCCACACATGGGTATGGAATTTGGCTCTGAAGATGTTGCTAAGAATTTTTATAATGAATATGCTAGACACATGGGTTTTAGCTCTAAGGTTGGCCCATATGGTCGCTCTAAAGCTGATGGCGAAAATATGTATAGGGAGTTTGTGTGTGGTGGGGAAGGTTTGAAAAAAAGCCCAAATGAAAGTTGCAATGCAATGATTAGGATTGAGCTAAAGGGTCAAAATAAATGGGTTGTAACAAAATTTGTGAAGGAGCATAGTCATTACATGGTGAGTTCCAGTAAGGCACACAGTCGTCGGCCAAGTAAGCATTTTTCCAGTGTTGGAAGGACAATGCCTGAAACATATCAAGGAGTGGGTCTTGTTCCCAGTGGTGTCATGTATGTATCTATGGATGGGAATCGTGTTTCAAATCAGAATACTCGTGGGGTGAAGAATATTCATACTGCTGCTGCTGAACGCAGTCACTTAGTTAAAAATTCCACATTGATGAATTATTCTGTTAGGCCTTGTTCTCAAAACAAGACATTGGGGAGGGATGCTCATAATCTGCTGGAGTATTTTAAGAAGATGCAGGCTGAGAATCCTGGTTTCTTCTATGCGATACAACTTGATGAAGAGAATCGTATGTCTAATGTCTTTTGGGCAGATGCAAGATCAAGGACAGCATACAGTTATTACGGAGACACAGTTCATCTGGACACAACATACAAGGTAAATCAATATAGAGTGCCATTTGCTCCTTTTACTGGGGTAAATCATCATGGTCAAATGGTTTTGTTTGGTTGTGCACTCATTTTGGATGATTCTGAGGCATCTTTTCTGTGGCTCTTGAAGACATTTCTCACAGCAATGAATGATCGCCAGCCTATCTCTATAACTACTGATCAAGACAGAGCCATGCAGACAGCAGTTTCTCAAGTTTTCCCACAAGCTCGCCATTGTATTAGCAAGTGGCAAATCTTGAGAGAAGGCCAAGAAAAGTTGGCCCATGTCTGTCTTGCACATCCAAATTTTCAGGTTGAACTTTATAATTGTATTAACTTGACAGAAACCATTGAGGAGTTTGAGTCATCTTGGAATTTTATCCTCAATAAATATGAACTCAGGGGAAATGATTGGCTTCAGTCATTGTATAATGCTCGTGCTCAATGGGTTCCGGCATACTTTCGTGATTCATTTTTTGCAGCAATATCTCCTACTCAAGGATTTGATGGTTCTTTTTTTGATGGTTATGTCAACCAACAGACGACGTTGCCATTGTTCTTCAGGCAGTATGAAAGAGCTTTAGAGAGCTGGATCGAAAAGGAAATAGAAGCTGATTTTGAGACAGTTAGCACAACACCAGTTTTGAAGACGCCTTCGCCAATGGAGAAACAGGCTGCTAATCTTTATACAAGAAAAATATTTTCAAAGTTTCAAGATGAGCTTGTTGAAACTTTTGTTTATACTGCAAATAGAATTGAAGGAGATGGGCCAAATAGCACATTTAGAGTTGCAAAATTTGAGGATGACCAAAAGGCATACATGGTTACATTAAACCATTCTGAGTTGAAAGCTAACTGTAGTTGCCAAATGTTTGAGTATGCAGGCATTCTTTGCAAGCATATTTTAACAGTTTTCACTGTGACAAATGTACTTACATTACCACCCCATTACATCTTAAAACGGTGGACACGGAATGCCAAAAACAGTGCTGGATTGGATGAACATACTGGTGAATCACATGCACAGGAGTCTTTGACAGCAAGGTATGGCAATCTTTGTAAGGAAGCCATCAGATATGCTGAGGAAGGGTCAGTAACTGTGGAAACTTATAATGCTGCAATAAGTGGTCTTAGAGAAGGTGTAAAAAAGGTTGCTAATGTGAAAAAAAGTGTTGCCAAAGTTACGCCTCCTAATAATCAGGCCAGTGGGACTGCATATGATGACAGGAAAACTACTCCAACTTTGGATACAACTCCTCTTTTATGGCCTTGGCAAGATGAAATAACAAGAAGGTTTAATCTTAATGATGCTGGTGGTCCTGTTCAATCAGTTGCTGATCTAAACTTGCCACGGATGGCCCCAGTCTCTCTTCATCGAGATGATGGTCCATCTGAAAACGTGGTAGTTCTTCCATGCCTAAAATCAATGACATGGGTAATGGAGAACAGGAACTCAACTCCAGGGAATAAAGTAGCTGTTATCAATCTGAAGTTGCAAGATTATAGCAGGGCTCCATCTGCAGAATCTGAGGTTAAGTTTCATCTCTCCAGAGTTACTTTAGAACCAATGTTGAAGTCTATGGCTTACATCAGCGAACAGCTGTCAACACCAGCTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACCGAGACAACCTCTGGTGAGTCAGAAGTAAAGTTTCAGGTGTCCAGGGATACATTGGGTGCTATGCTGCGATCAATGGCCTATATCCGTGAGCAGCTTTCTCATGCTGATGATGCACAATCAGAACCTCTGTCGAAAAAACACAGGAAGTAA 2643 0.4045 MDVQVINVEVSGHQTKADDGDAEPSDGEVNNAENYGSHVEDEISEPHMGMEFGSEDVAKNFYNEYARHMGFSSKVGPYGRSKADGENMYREFVCGGEGLKKSPNESCNAMIRIELKGQNKWVVTKFVKEHSHYMVSSSKAHSRRPSKHFSSVGRTMPETYQGVGLVPSGVMYVSMDGNRVSNQNTRGVKNIHTAAAERSHLVKNSTLMNYSVRPCSQNKTLGRDAHNLLEYFKKMQAENPGFFYAIQLDEENRMSNVFWADARSRTAYSYYGDTVHLDTTYKVNQYRVPFAPFTGVNHHGQMVLFGCALILDDSEASFLWLLKTFLTAMNDRQPISITTDQDRAMQTAVSQVFPQARHCISKWQILREGQEKLAHVCLAHPNFQVELYNCINLTETIEEFESSWNFILNKYELRGNDWLQSLYNARAQWVPAYFRDSFFAAISPTQGFDGSFFDGYVNQQTTLPLFFRQYERALESWIEKEIEADFETVSTTPVLKTPSPMEKQAANLYTRKIFSKFQDELVETFVYTANRIEGDGPNSTFRVAKFEDDQKAYMVTLNHSELKANCSCQMFEYAGILCKHILTVFTVTNVLTLPPHYILKRWTRNAKNSAGLDEHTGESHAQESLTARYGNLCKEAIRYAEEGSVTVETYNAAISGLREGVKKVANVKKSVAKVTPPNNQASGTAYDDRKTTPTLDTTPLLWPWQDEITRRFNLNDAGGPVQSVADLNLPRMAPVSLHRDDGPSENVVVLPCLKSMTWVMENRNSTPGNKVAVINLKLQDYSRAPSAESEVKFHLSRVTLEPMLKSMAYISEQLSTPANKVAVINLKLQDTETTSGESEVKFQVSRDTLGAMLRSMAYIREQLSHADDAQSEPLSKKHRK 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00530 880 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 34 808 - -
Gma20g00530 880 Pfam MULE transposase domain 275 366 IPR018289 -
Gma20g00530 880 SMART 26again6 564 591 IPR006564 GO:0008270
Gma20g00530 880 MobiDBLite consensus disorder prediction 1 31 - -
Gma20g00530 880 Pfam FAR1 DNA-binding domain 60 135 IPR004330 -
Gma20g00530 880 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 808 IPR031052 GO:0006355
Gma20g00530 880 Pfam SWIM zinc finger 559 587 IPR007527 GO:0008270
Gma20g00530 880 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00530 Gma-Chr20 12655412 12671026 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma20g00530 MULE 5.1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00530 - - gmx:100786516 1762.27