Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00499 ATGACTTACTGGGACCATGTTTTGGAGGGCATGAAACTTCTCATTAATTGGGACCAAGTCATTGCCACTATTCTATCAGTTGTTATTTCGCCTACAATACTATCTGCAGGGGCCACTACACTCACCTGCTATGCTATGGCAGCAACCCCTATAGCAGCTACGCTATATCGATGGGATGAGGTGAATGGTTCGAGGCAGTGGGTACCACAATGGGCTGTAGTTTCAAATCCATCTGACATTGCTGGAGTTTGTGGCAATAGAGTTTGTAATTTGGAGAGAAGTAAGACAAAAGCCAGTTGCACTTGCTTGCCAGGAACTTATAAAGTTGTTAGGGATGGCCAGTGCTATGATAATTCATCTCTTGTTGGAAATTGCAATGGCAAGCATGAAAACCTGACATCACAGTTTAGGATTTCAGCGGATACTAGCTCAACTTTGTTTATAAAGGTCAGAGCAAATGGGTCATGGACTTCAGAAGGCCAAGCAGGAGGGTCTAATAGCTCCTCTGATGGAATGGGAAGTGCAAAGGAGAAGGCTGTGATTATTCCTACTGTTCTAAGCATGGTAGTTCTCATTGTTTTGCTGAGTTTATTATTGCTTCTCATTTATGAGTTCATGAAAAATGGATCCATGGATAAATGGATCTTCCCTTCATATCAAGGTCGAGATAGATTGTTAGATTGGACATCTTGTTTAAATATAGCCATAGCTACTGCACAAGGGATTGCATACTTTCATGAGCAGTGTAGGGATCGGATAATACATTGTGACATCAAACCAGAAAATATATTGGTAGGCGAAAACTTTTGTCCCAAAGTATCTGATTTTGGGCTGGCCAAATTGATGGGAAGGGAGCACTCTCATGTGGTGCAATGCTATGGAATGCTTCTTTTAGAGATCATTGGTGGCAGGAGAAATCTTGACATGTCCTTTGGTGCTGAGGACTTTTTCTATCCTGGTTGGGCTTACAAGGAGATGACAAATGGGTCAATAATTAAGGTGGCAGATATGAGATGA 1017 0.4189 MTYWDHVLEGMKLLINWDQVIATILSVVISPTILSAGATTLTCYAMAATPIAATLYRWDEVNGSRQWVPQWAVVSNPSDIAGVCGNRVCNLERSKTKASCTCLPGTYKVVRDGQCYDNSSLVGNCNGKHENLTSQFRISADTSSTLFIKVRANGSWTSEGQAGGSNSSSDGMGSAKEKAVIIPTVLSMVVLIVLLSLLLLLIYEFMKNGSMDKWIFPSYQGRDRLLDWTSCLNIAIATAQGIAYFHEQCRDRIIHCDIKPENILVGENFCPKVSDFGLAKLMGREHSHVVQCYGMLLLEIIGGRRNLDMSFGAEDFFYPGWAYKEMTNGSIIKVADMR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00499 338 Gene3D Transferase(Phosphotransferase) domain 1 189 295 - -
Gma20g00499 338 PANTHER OS07G0415500 PROTEIN 200 338 - -
Gma20g00499 338 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 53 138 - -
Gma20g00499 338 SUPERFAMILY Protein kinase-like (PK-like) 198 312 IPR011009 -
Gma20g00499 338 ProSiteProfiles Protein kinase domain profile. 116 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00499 338 Pfam Protein kinase domain 199 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00499 338 SMART serkin_6 116 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00499 338 PANTHER OS07G0415500 PROTEIN 136 199 - -
Gma20g00499 338 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 136 199 - -
Gma20g00499 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Gma20g00499 338 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 200 338 - -
Gma20g00499 338 PANTHER OS07G0415500 PROTEIN 53 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00499 Gma-Chr20 10738496 10741936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00499 201 326 Receptor kinase-like Gene Family AT1G66980 36.875 9.92e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma20g00499 Pkinase 3.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00499 - - gmx:102670544 317.005