Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00498 ATGAAAGATGACAAACAGGCTCCAGTTCCTGCTTCTACAACCgaaggacaacctatacgatgtaaagcggcggtttctagaagagctggtgagccgttggttattgaggacatcattgtggcgccgccaaagcctcgtgaggctcggattcgtattatttgttcctctctctgccacagcgacatcacacttcggaaccttcaggaccctcctgccattttcccaaggattctaggtcatgaggcaactggGGTTGTGGAAAGTGTTGGGAAGGATGTAACTGAAGTTACAAAAGGTGATGTGGTAATTCCAGTTATCCTACCAGAATGTGGGGAGTGCATAGATTGCAAATCAACCAAGAGCAACCGGTGCACTAATTTTCCTTTCAAGGTGTCTCCTTGGATGCCTCGAGATGGCACCACAAGATTCACTGGCCAAAATGGAGAGATCATATACCATTTCTTGTTTATTTCAAGTTTCAGTGAGTACACTGTGGTGGACATTGCTAATCTGATAAAGATTGATCCAGAAATTCCTCCTGACAGAGCATGCCTTCTCGGATGTGGTGTTTCAACAGGGGTAGGTGCTGCTTGGAGAACTGCAGGTGTGGAACCCGGGTCAACAGTAGCTATTTTTGGGTTGGGATCTATTGGATTAGCTGTTGCAGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATAGGTGTGGACATCAACCCAGAAAAGTTTGAAATTGGAAAGAAGTTTGGAGTCACAGACTTTGTCAATGCTGGAGAATGTGGGGGCAAACCTGTTGGCCAGGTTATCATAGAGATAACTGATGGGGGAGCGGATTATTGCTTTGAATGTGTTGGTATGGCATCATTGGTGCATGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAACAATTGTTTTAGGAGTGGACAAGCCCGGAGCTAGGATAAACCTCAGTTCTTACGAGGTCCTTCATGATGGAAAGAGCCTCATGGGATCCTTATTTGGAGGTCTCAAACCCAAGTCTCATGTACCCATTCTCCTTAAACGTTACATGGACAAGgaattgcagttggataaatttgtcactcatgaggtggagtttaaggacatcaataaagcttttgatttattgagtaaaggagagtgtcttcgaTGTGTGATTTGGATGGATAAATGA 1179 0.3291 MKDDKQAPVPASTTEGQPIRCKAAVSRRAGEPLVIEDIIVAPPKPREARIRIICSSLCHSDITLRNLQDPPAIFPRILGHEATGVVESVGKDVTEVTKGDVVIPVILPECGECIDCKSTKSNRCTNFPFKVSPWMPRDGTTRFTGQNGEIIYHFLFISSFSEYTVVDIANLIKIDPEIPPDRACLLGCGVSTGVGAAWRTAGVEPGSTVAIFGLGSIGLAVAEGARLCGATRIIGVDINPEKFEIGKKFGVTDFVNAGECGGKPVGQVIIEITDGGADYCFECVGMASLVHEAYASCRKGWGKTIVLGVDKPGARINLSSYEVLHDGKSLMGSLFGGLKPKSHVPILLKRYMDKELQLDKFVTHEVEFKDINKAFDLLSKGECLRCVIWMDK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00498 392 Pfam Zinc-binding dehydrogenase 217 337 IPR013149 -
Gma20g00498 392 Gene3D - 24 385 - -
Gma20g00498 392 Gene3D - 193 333 - -
Gma20g00498 392 SUPERFAMILY GroES-like 14 199 IPR011032 -
Gma20g00498 392 SUPERFAMILY GroES-like 341 389 IPR011032 -
Gma20g00498 392 PANTHER ALCOHOL DEHYDROGENASE 14 389 - -
Gma20g00498 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 178 353 IPR036291 -
Gma20g00498 392 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 79 93 IPR002328 GO:0008270|GO:0016491
Gma20g00498 392 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 14 389 - -
Gma20g00498 392 Pfam Alcohol dehydrogenase GroES-like domain 46 174 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00498 Gma-Chr20 10502664 10509428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00498 46 214 Monolignol Biosynthesis Gene Families AT4G37970 26.471 1.82e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00498 K00121 - gmx:100817521 803.127