Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00495 ATGCCATCATCCATGGCTTTCCTTTCACATCCTTATTTCTTTGCAGCTTTATCTGCACCTTTGACTCTTTTGGTGGTCCAAATTCTGTTCAGAAAACTGAACAAAAGGCATAATAGAAAGAAGTACCACCCTGTTGCTGACACCATCTTCAATCAGATGCTAAACTTCAACAGGCTGCACCATTATATGACTGATCTTGCTGCCAAGCACAAGGCTTACAGGCTGCTCAACCCTTTCAGATATGAGGTTTACACCACTGAGCCAACTAATGTTGAGTATATACTCAAAACCAATTTTGAGAATTATGGAAAGGTAGGTGCTGGATTTGGATCTAAGAGAAAATATATGTTTCGGAAAGTGACCATCCAGCTCAAGCTTGTGGAGGGTGACTCTGCTGGAACTGGACCATTTCTATCTCAATGCATTGAGCTTTTCTCAAGTGCAGACAACCCGATTTGCATCAATGAATTGAATATTACCAGTTTAGGCATCATGGAGATTCCTATTTGCTTAGGTGGCTCCATTTCATCCACTGGCTCCACTTTATATGTGCTCATCATGGAGTTCCTTTATAGAACAGGTGGTGATGGTCCTCTTGTTGCTTTTGGTGCATCTGATGGTGTCATTAGAGTTCTATCAATGATGACATGGAAGCTTGTGCGAAGGTACACTGGAGGTCATAAGGGGTCTATCTCTTGCTTGATGTCATTCATGGCTGCTTCTGGTGAGGCTCTTCTGGTTTCGGGTGCTAGTGATGGATTGCTCATAATTTGGAGTGCTGACCACGGACAGGATTCACGTGAACTTGTACCCAAGCTGAGTTTAAAAGCACATGATGGAGGGGTTGTGGCAGTTGAGTTGTCAAAGGTGATGGGAGGTGCTCCTCAGCTAATCACAATTGGTGCTGATAAGACATTAGCCATATGGGACACCGTCTCCTTTAAGGTGTATTGTATGGTTGCACATACTTTGCAGCCTCATCTTGTAGCTGTTGGAACCAACATTGGTGTTATTATCTGTGAGTTTGATGCTAGATCTCTTCCACCTGTTGCTCCTCTACCAACCCCATCAGACAGTAAAGAGCATTCTGCCATATTTGTAATTGAAAGGGAATTAAAGCTATTAAATTTTCGGTTAAACAATTCTGCAAATCCATCTCTTGGAAATAACAGCTCCTTGTCAGAAACAGGAAGACCCAAGGGAGATTTTTTTGAACCATTACCTATCAAGCAGGGGAAGAAGCACATAAGTACTCCTGTTCCACATGATTCGCATTCAGTTCTTTCTGTCAGCAGTTCAGGAAAGTATCTAGCAATTGTTTGGCCAGATATTCCTTATTTCTCTGTCTACAAGGTTAGTGATTGGTCAATTGTTGACTCTGGAAGTGCAAGACTTCTCGCTTGGGATACTTGTCGTGACAGATTTGCTATATTGGAATTAGCATTACCGCCTAGAATTCCTATAGTTCCCAAGGGTAGTTCATCAAAAAGAGCGAAAGAAGCTGTTGCGGCACAAGTAGCAGCCGCAGCTACTGCTGCTGCTTCCACAACTTCCTATACATTTTTTGGCTTTGTCACTAGTGGACTCTTTTAG 1593 0.4256 MPSSMAFLSHPYFFAALSAPLTLLVVQILFRKLNKRHNRKKYHPVADTIFNQMLNFNRLHHYMTDLAAKHKAYRLLNPFRYEVYTTEPTNVEYILKTNFENYGKVGAGFGSKRKYMFRKVTIQLKLVEGDSAGTGPFLSQCIELFSSADNPICINELNITSLGIMEIPICLGGSISSTGSTLYVLIMEFLYRTGGDGPLVAFGASDGVIRVLSMMTWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLLIIWSADHGQDSRELVPKLSLKAHDGGVVAVELSKVMGGAPQLITIGADKTLAIWDTVSFKVYCMVAHTLQPHLVAVGTNIGVIICEFDARSLPPVAPLPTPSDSKEHSAIFVIERELKLLNFRLNNSANPSLGNNSSLSETGRPKGDFFEPLPIKQGKKHISTPVPHDSHSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILELALPPRIPIVPKGSSSKRAKEAVAAQVAAAATAAASTTSYTFFGFVTSGLF 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00495 530 PANTHER TSET COMPLEX MEMBER TSTF 315 518 - -
Gma20g00495 530 PANTHER TSET COMPLEX MEMBER TSTF 185 315 - -
Gma20g00495 530 SMART WD40_4 216 259 IPR001680 GO:0005515
Gma20g00495 530 SMART WD40_4 268 310 IPR001680 GO:0005515
Gma20g00495 530 PANTHER TSET COMPLEX MEMBER TSTF 315 518 - -
Gma20g00495 530 SUPERFAMILY WD40 repeat-like 184 461 IPR036322 GO:0005515
Gma20g00495 530 PANTHER TSET COMPLEX MEMBER TSTF 185 315 - -
Gma20g00495 530 ProSiteProfiles Trp-Asp (WD) repeats profile. 275 310 IPR001680 GO:0005515
Gma20g00495 530 Gene3D - 192 443 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00495 Gma-Chr20 10420557 10425855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00495 3 104 Cytochrome P450 AT2G44890 38.235 1.60e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00495 - - gmx:100811133 634.795