Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00494 ATGAATGTCTGGGAATTTACAAGTGATGAATCTAGTGGTTTGGATAGCAACATTCATGGCAGCTACCTCGGTATGATTGAAAAGATATTCCGTTCAATTGATTCAAATTCTGTCAAGGGGTTTCCAAAGGAGCCAAAAGATGCATCTAGCATGAATCTTGTATGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTAAAGGCCATTCGTGCTGCACAACATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCATATAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATTCCTATGGAAATTGCACTGAAGATTGCTGCAAAGATAAGGGCAAACGAGAGACTTGCAGTGTACATTGTCATTCCAATGTGGCGCCAGAGGCATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAAGTTGGTCTCGAAGCAGCATTCTCTCCACAAGACTATTTGATCTTTTTCTGTCTTGGCAATAGGGAGGCCATAGATATGTATGAGAATATCACTGCCAGAACCAATCGACGTTTCATGGTTTATGTTCGTTCAAAAGGCATGATAGTTGATGATGAATATGTTATATTGGGGTCTGCAAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACATCGAGATTGCAATGGGTGCCTACCAACCTCATCATACCTGGCAAGAAGGCAGTATTATCCTAGTGGGCAGAGATGACAAGGCATCAGCTCAAATGATGCCCAAGTACCCGGTAGAAGTCGATCGAAAGGATTCCACACCTTCTAGAGCTTGCCTCACACTTAGTGTTAGTGCAGTTTTATTAGGGGGAGTAGGTATTGCACACATGATTCAAAAGATTGAAAATAAAGAGTACATGGGATTTGGAGACCTTTGCACGTACAGAAAATAA 942 0.4034 MNVWEFTSDESSGLDSNIHGSYLGMIEKIFRSIDSNSVKGFPKEPKDASSMNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAAKIRANERLAVYIVIPMWRQRHKTMQMMYETIYKALVEVGLEAAFSPQDYLIFFCLGNREAIDMYENITARTNRRFMVYVRSKGMIVDDEYVILGSANINQRSMEGTRDIEIAMGAYQPHHTWQEGSIILVGRDDKASAQMMPKYPVEVDRKDSTPSRACLTLSVSAVLLGGVGIAHMIQKIENKEYMGFGDLCTYRK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00494 313 Pfam PLD-like domain 70 227 IPR025202 -
Gma20g00494 313 Gene3D Endonuclease Chain A 2 240 - -
Gma20g00494 313 SUPERFAMILY Phospholipase D/nuclease 53 227 - -
Gma20g00494 313 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 191 218 IPR001736 GO:0003824
Gma20g00494 313 PANTHER PHOSPHOLIPASE D ALPHA 1 28 245 - -
Gma20g00494 313 PANTHER PHOSPHOLIPASE D 28 245 IPR015679 -
Gma20g00494 313 SMART pld_4 191 218 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00494 Gma-Chr20 10414018 10419945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00494 28 238 Phospholipase D Gene Family (Wang group) AT2G42010 66.920 4.47e-114 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00494 K01115 - gmx:100805294 386.341