Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00489 ATGCTCTCCTTCGGCTACCTCCGCGAGTGCATCCAAGTCTACGGCATCGTTCGAAAATCCTCTGTGGATGCGAGCTTCCGCAATCTCCACATCAAAAAGCTCAGCATTAGAGACGTTCAACGCCTTGAGTGGGAGCAGCTTGGGAACAAAATTAGACGCTGGATAAAAGCCGCCAAGGTCTGCGTTAGAACTCTGTTCGCGAGCGAGAAGAAGCTTTGCGAGCAAATCTTCGACGTTGTCAGAACTTCCATCGACGATGCTTGCTTCACGGAGATGGTGAAAGGTCCCGTGATTCAGCTCTTCAACATCGCCGAGGCGATTAGCATAAGCCGTAGGTCGCCAGAGAAGTTGTTCAAGATTCTGGATTTGCATGATGCCTTGACGGATTTGATTTCGGATATCGACGTCGTGTTTGATTCAAAGTCGTCGGAGTCGATTAGGGTCGCAAGGGAGAGCATGTGGGTGGAGAGGAATGAGTGA 480 0.5042 MLSFGYLRECIQVYGIVRKSSVDASFRNLHIKKLSIRDVQRLEWEQLGNKIRRWIKAAKVCVRTLFASEKKLCEQIFDVVRTSIDDACFTEMVKGPVIQLFNIAEAISISRRSPEKLFKILDLHDALTDLISDIDVVFDSKSSESIRVARESMWVERNE 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00489 159 Gene3D Exocyst complex component Exo70 1 156 - -
Gma20g00489 159 SUPERFAMILY Cullin repeat-like 1 144 IPR016159 -
Gma20g00489 159 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 149 IPR004140 GO:0000145|GO:0006887
Gma20g00489 159 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 149 - -
Gma20g00489 159 Pfam Exo70 exocyst complex subunit 53 148 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00489 Gma-Chr20 9913878 9914357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00489 1 148 EXO70 exocyst subunit family AT1G72470 73.154 1.81e-69 219