Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00488 ATGGGGATTCAGACAGTGGGATCTCTAGGTAACGGGCAACAGTCTCATTTACAGCCTTCATCATTGTCTAGGCAAGGTTCATGGTATAGTCTCACTCTTGATGAGGTCAATTGTCAATTAGGAGACATGGGAAAGCCATTGGGGAGCATGAACCTTGATGAGCTTCTTCAAAATGTGTGGACTGCTGAAGCAAGCAAGTCTTCGGTGGTGGTAGGCGTGGAGAGTGAGAACATGTCGTCATCGTCTTCCTCGCTGCAACGGCAGGCCAGCTTGACGCTGGCTCGTGCATTGAGTGGGAAGACGGTGGATGATGTGTGGAGGGAAATTCAGCAAGGTCAGAAGAAAAAGTATGGAGAGGATGTGAGGAGTCAGGAGGGAGAAATGACTCTTGGTGAGACCACCTTGGAGGATTTCTTGGTGCAAGCAGGGCTTTTTGCTGAAGCTTCTATCAGTCCAGCTGTGGGGTTGGATGCAATGGATTCCCTTGCCACGCAAGGTTTCCAACAGAAAACAGGCCTGTTATCATCCTCCCCCTCAATCGGGAGTTTATCAGACACGAGACTGGGCCGGAAAAGGGATGCTTCTGATGCGTACGAGAAAACTTTGGAAAGGAGGTTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCTCGGTCCCGAGCCCGAAAACAGGCTTACCATAATGAACTGGTTGGCAAGGTTTCCCGTCTAGAAGAAGAAAATGTAAAGCTCAAGAAAGAGAAGGAATTTGAAGAACGATTACTGCCTGATCCATTGCCTGAACGGAAATATCAACTTCGAAGACATAATTCTGCCTTTTTCTGA 825 0.48 MGIQTVGSLGNGQQSHLQPSSLSRQGSWYSLTLDEVNCQLGDMGKPLGSMNLDELLQNVWTAEASKSSVVVGVESENMSSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKKYGEDVRSQEGEMTLGETTLEDFLVQAGLFAEASISPAVGLDAMDSLATQGFQQKTGLLSSSPSIGSLSDTRLGRKRDASDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEENVKLKKEKEFEERLLPDPLPERKYQLRRHNSAFF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00488 274 PANTHER BZIP TRANSCRIPTION FACTOR 35 271 - -
Gma20g00488 274 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 35 271 IPR043452 GO:0003700|GO:0045893
Gma20g00488 274 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 202 247 IPR004827 GO:0003700|GO:0006355
Gma20g00488 274 Pfam bZIP transcription factor 204 248 IPR004827 GO:0003700|GO:0006355
Gma20g00488 274 SUPERFAMILY Leucine zipper domain 204 252 IPR046347 GO:0003700|GO:0006355
Gma20g00488 274 Coils Coil 227 254 - -
Gma20g00488 274 MobiDBLite consensus disorder prediction 173 196 - -
Gma20g00488 274 MobiDBLite consensus disorder prediction 1 21 - -
Gma20g00488 274 CDD bZIP_plant_BZIP46 204 241 - -
Gma20g00488 274 Gene3D - 202 254 - -
Gma20g00488 274 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 207 222 IPR004827 GO:0003700|GO:0006355
Gma20g00488 274 SMART brlzneu 200 272 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00488 Gma-Chr20 9901918 9911907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00488 21 274 bZIP Transcription Factor Family AT3G56850 46.367 1.36e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma20g00488 bZIP_1 1.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00488 K14432 - gmx:100807027 466.848