Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00465 ATGGCCACAACAGCAAAGAATGTGGTGGTGATCCAGGATGCATCTAAAACACTTAATTTAAGAGTTTTTTATTGGATTATAAATGGCTTATCTCTTAAGCCAGAAGATGTGGTGACCCTAGTTGCAATCCTGCATGAGGTTTATCATCCTATGGGGTACAGAATCACGGTGGATAACAAGTTGCTTGGGGTAAACCAGAGGATCATCGAGCAAGAGCTTGCAAATAAGAAACAAGACTACCTGATGGATGAGGGGCTTGCTCAGATTGTTAAACACTACGCATCAAATAAGGTTGCATTTAAGATAAAGTTGTTTCCAGGATCTTCACCAAAAGATGTGGCTTTAGAACAGGCCACAAAACTCAATGCAACTTGGGTGATACTTGACAGGCAAATGAAGAAAGATAAGGAGTTTTTCCTGGAGAAGCTTTCTTGTGGTATATCTATATTAAGGCATAACAATCGGATTGTTCGACTACGACCTATAGATCTCCCAGACGAAATACCATGTAACGGCCATGAAACATATGATGAAAGCTTACCAAGTGTTCCATATAAAGATCTTTTCAACGTTGATGTTTTCCCCAAGAGCACACTTGAAGTTGATGAGTTGAACCAGATACAAAGCAGGCCCTATGAGGAAGAGGGGTGCTCAAATATTACTACCAATACTAATGAAAAAACATGTCAGACAATGGATGGAACAGAAATAAATAGTAACCAAATGATTGACAAAATAGAAAGAGATGAGCAAGGCCAAGATCAAGAACAGTTGCAAAGCATGCCCCATGAGACAGAGGAGGACACAACAATTGTGATTAAAAATGATCAAACAACTGCTCGAGAAATAGGTGATCAACCGAACCAAGATGAAGAAAAGACAAACAACTTCCTCAATGGTGAGAGGTGGGACTTGAGGAATCCAGAAAAGAATGAAGAAATGATTAATCAACCAATAGATGATCTGCTGAGCCGGAATCAAGCACAGATGCTGAGCATATCCAATGGGGTTATATTGGATGGAGAGGAAGAGAAAATTATTTTGGAAAACTCAATGTCCACTTTCTGCTCTGTCTGCAAAACTAGACGACCAAATATTGGGTGGAAAAAGGAATTTAGTTATGAAGAACTCCAAGCAGCCACAGATGCATTTTCATTGAAGAATTGTCTCTCTGAAAGTGGATCTCTATTCACTTTCCAAGGCCAGATGGAGGGAGGGATGAAACTAGTGGTTAAGCAGCATGATGTAAGAAACACTCAAGTAAGGGAAAAAGTTAATTCAGGAATGCAAACCATCCTCAAAGCTAGACATAAGAATGTGATCATGCTATTTGGTTCATCTACAGCAGAATGTTTCCTGTTCACTGTATATGAGTATGCATGCAATGGTTCACTTGACAAGTATCTATCAAAAGAAGGCTCCAGACCATTGACTTGGATAGAAAGGAAAAGAGTTGCAATAGGCATTGCCAGAGGTCTTAAGTACCTACATGAAAATAACATTGTTCATTGCAATATAAAACCAAGCAATATTCTTCTAACACATGACTTCAAACCAATGATTGGAGATTTTGGCTATGGGAAAGAACTAGATTTGAAGTCCTACAAAAATAAAAACAAAGGGAATTGCGAATATGCAGCACCAGAATACCAGGAAAAGCGGAAATTTTCAACTAAGACAGATGTATACTCATTTGGTGTGGTTATTTTAGAGTTGATCACAGGGCGAAGGACTACAGATTTAATGTTGGAAGATAAATGCCTTGTTGAATGGGCAAAGCCTCTTCTTAAAAGAAAGAAGTACTCAGAGTTGGTGGATCCCATAATCAGAAACTCATACGAAGAGGAACACCTTCGTTGGCTGGTCCAAGTAACAACACAATGTCTAAAAAAGAATCCTAAGGAAAGATTATCAATGAATATGGTTGTTTCTGCATTACAAGGCATAGCAGAAAGTGAAACCTGCCACATGACAGAAGACATTACTCCAGCTATATCAGATTCAACAATTGTGCCAGACATAAATGGTTCACAAGGTCCAACAACAACAAAAGCTGATGAGCAAAGTCAGGAAGAGGAGAAAATCAAGAGCAGATTCCATGCGGAGGAAAAGAAGTTAAGACTAATAATTGAAAATAATCACTTTTACTCCGATAAACTTGGCCAGATTGAAGAACAGATGCAGAGAAGGCCCCAAGGGGAGGAGAAGAGCTCAGGAAAGTTGATAATCAATGACCGCATGATGGATCAGACAGTAGTTAATCAGCTGAGTGAGTTTGAAGAACAGATGCCAAGCACCTTCCATAGGGAAGGCATCACAACTCAGAAAATTAGTGTCAACCACATGATAAGTCCCACAAAAGGTGATCAGTTGAGCCAGGATCAAGAAGAGGAGATAAACTTTATTGAAATGAAAATAGGCTTAATACCAGAACCTATTAGTGGAATGATAGATCAAACAAAAGCAGATCAGCTGGTCCAGGATAAAACACAAACACAGCGGAGATGCCATGACGATTTACTGGATGAGCGTCAAGGTGAAATCATTTTGGAGAATTCAAAGTCCTCTGCATGCTGTATATGCAAAAGTAGGCGTCCGAACAATGCATGGACAAAAGACTTTAATTATGAAGAACTCCTAGAAGCTACAGAAGGATTTTCAATTGAGAACTCGTTATCAGAAAGAGAAGATGGACCTACTTTTGAAGGCTTGCTAGAGAGACAGGTAAAAATAGTTGTTAAGAAATATCAAGTTACTACATCCCACCAAGAGAAGATATTAAAATCAGAAGTACAGTTGTTCATCAGTGCTAGACATAAAAATGTGGTCATGTTGTTGGGTTTATGCACAAATAAAAGCCAACTGATGATTGTGTATGAGCAAGTATGCAACGGTTCACTTGAACAGTACCTAACAAGGGGAAGTTTCCAGTCATTGACTTGGAAGCAAAGGCTGAAAGTGGCAATGGGTACTGCCAGAGGTTTAAAGTACCTACATGGGAATAACATAATTCATGGAAATATAAAACCAAGTAACATTCTTCTAACACATGACTTCGAACCACGGATTGGAGATTTTGACTTTGGAAAAGTGAAACATGGACCAAAGAAATCCAGCAAAGATAAAAGTGTACGGAATTCTGGATATGCAGCACCTGAGTATGTTGAGAATGGAAAAGTATCAAATAAGACAGATGTGTACTCCTTTGGAGTGGTTCTTTTAGAGCTGATCAGTGGCCGGAGGGCTACAGACAAATTACCAGGTGGAAAAAGCCTTGTTGACTGGGCAAGGCCTCTACTGGGAGGAAAGAAGTACCCTAAGTTGGTGGATCTGAAAATCAGTAACTCCTATGAAGAAGAAAAACTTCTATGGTTGGTTCAAGTAACAGAACAATGTCTCAGAAAGAATCCTAAGGAAAGAATAACAATGAATATGGTTGTATCTTCATTACAAGGCATAGAAGAATCAGCTGAGTATTCTGTAATTGAAGACTCTCCTCCAGAAAACTCATGCTTACCACATGATGAGCCTGCCATGATTAGTACACAAGGTCAAATGAAAGCTGATCCAGTGAAGCAGGAGCAAGAATGGATTGGCAGAAACCAATATGAGGAGGAAAGAAGCCTAAGATTAACAGTCATAACCAATGACATAATAGGTCAGCGAAATGCAGATCAACTGATACAGGGTGGAGAAGATGTGCAGAGCAGCCCCCATGAAGAGATGTCCAGAGTAACAGTTATCAGCAATGACGTGATTGATGAGAAAAATTCTAACCAAAAAATCCAGGAAAAACTGCAGATTAAGGGAAGCTGTGATGAGGGTTTGAAGAATGCGAATGAAGCGAAAGTCATTTTGGAGAATTCGAAGTCTTCTGTATGCTCAATCTGTAGAAGTAGGCGTCCATACAGTGGATTGCAAAAGAAATATACTTATGAAGAACTTGAAGCTGCTACAGAAGGATTTTCAATAAAGTATTCTCTATGTGAAGGTGAATATGGACCTGCTTTCAGAGGCCAGCTAGAGAATAACCAAGAAATAGTTATTAAGCAACACACATTCACAAGCTTACAAGAACAGAAGGTCTTTATCTCAGAATTCCAATTGCTCATAAATGCCAGACATGAAAATGTGATCATGCTGTTGGGTTCGTGTATACGATTAAGTCAATTGCTAATTGTATACGAGAAGGCATGCAACGGTTCACTTGACCAGTACTTATCAAGGCAAAGTGCTACATCATTGACTTGGGGAGAAAGGGTGAAAGTTGCAATAGGTGTTGCCAGAGGTCTAAAGTATCTACATGAGAATAATATAGTACATGGAGGAATAAAACCTAGTAACATTCTTCTAAATCATGAGTTCAAACCAATGGTAGGAGATTTTGTGTTTGGAAAAGAAAGATGTGAATTGAAGAATGTCTGCAAGCAAAAAAGTATACGGAATTGTGGATACACTGCACCAGAGTGTCAGGAGAGTGAAGAATTATCAACTGAGGCAGATGTGTACTCTTTTGGTGTAGTTCTTGTAGAGTTGATTGCCGGCCGTATGATAGCAGATAAAATATTAGGACAGAAATGTCTTGTTGAATGTGTAAGGTCACTTCTTGGACGAAGAGAGTATCGACAGTTGGTGGATCCCAAAGTCAGAAGCTCCTATGATGAACAAGAACTTGTTTCATTGTTCCACATAACAGAAAATTGTCTGAAAAAGAATCCAAAGGAAAGATTCACAATGAATATGGTTGTCTCTGCACTGCCATGTGTAGCAAATAGCAATGGCCTCTATGTAAAGGAAGACTTTTCACCAGAAAACTCAAATGTTTCAGATGCAAAAAACTCAAAAGGTAAGCTTGGGTCTAGTTTTTCTAAAGCAAAGAGTGTTCTAGAATTAAAATTGGTTTCATCCACCACTCTCTCATTCTCTCTCCTTCGCCCTCGATCCCTTCATTTTTCCCTCAAATTCCACGCCTCCTTCTCCTTGAAGTCCCCGACCTCCACCTTTCGTGCCTTCTCCAACGCCGATGAGGACGAAGAAGACGATGAAGAAGAAGACCAAGACCAAGACAACGTTTCTGCTGACGAATACGATGACGTTTTGGGTGAGGCTTCTGACGAGGCCGACGTGTTCGCTTGGCACAGTGGATTCAAGTGGCAGAGAGTCGACAAGCTATGCAATGAAGTCAGGGAGTTCGGCGCCGATCTCATTGACGTCGATGAGCTCACCTCCGTCTACGACTTCCGCATTGACAAGTTTCAGCGGCAGGCGATACTGGTTTTTTTGAGAGGCTTCTCGGTGGTGGTTTCCGCTCCGACGAGCAGCGAGAAGACGCTGATTGCGGAGGCTGCGGTGGAATGTGAGTACTTATTGACTACTGCTTTTCATGTAGTGTTGGTAATGTTTCTTCTGGAAGTGGACTTGTAA 5424 0.4019 MATTAKNVVVIQDASKTLNLRVFYWIINGLSLKPEDVVTLVAILHEVYHPMGYRITVDNKLLGVNQRIIEQELANKKQDYLMDEGLAQIVKHYASNKVAFKIKLFPGSSPKDVALEQATKLNATWVILDRQMKKDKEFFLEKLSCGISILRHNNRIVRLRPIDLPDEIPCNGHETYDESLPSVPYKDLFNVDVFPKSTLEVDELNQIQSRPYEEEGCSNITTNTNEKTCQTMDGTEINSNQMIDKIERDEQGQDQEQLQSMPHETEEDTTIVIKNDQTTAREIGDQPNQDEEKTNNFLNGERWDLRNPEKNEEMINQPIDDLLSRNQAQMLSISNGVILDGEEEKIILENSMSTFCSVCKTRRPNIGWKKEFSYEELQAATDAFSLKNCLSESGSLFTFQGQMEGGMKLVVKQHDVRNTQVREKVNSGMQTILKARHKNVIMLFGSSTAECFLFTVYEYACNGSLDKYLSKEGSRPLTWIERKRVAIGIARGLKYLHENNIVHCNIKPSNILLTHDFKPMIGDFGYGKELDLKSYKNKNKGNCEYAAPEYQEKRKFSTKTDVYSFGVVILELITGRRTTDLMLEDKCLVEWAKPLLKRKKYSELVDPIIRNSYEEEHLRWLVQVTTQCLKKNPKERLSMNMVVSALQGIAESETCHMTEDITPAISDSTIVPDINGSQGPTTTKADEQSQEEEKIKSRFHAEEKKLRLIIENNHFYSDKLGQIEEQMQRRPQGEEKSSGKLIINDRMMDQTVVNQLSEFEEQMPSTFHREGITTQKISVNHMISPTKGDQLSQDQEEEINFIEMKIGLIPEPISGMIDQTKADQLVQDKTQTQRRCHDDLLDERQGEIILENSKSSACCICKSRRPNNAWTKDFNYEELLEATEGFSIENSLSEREDGPTFEGLLERQVKIVVKKYQVTTSHQEKILKSEVQLFISARHKNVVMLLGLCTNKSQLMIVYEQVCNGSLEQYLTRGSFQSLTWKQRLKVAMGTARGLKYLHGNNIIHGNIKPSNILLTHDFEPRIGDFDFGKVKHGPKKSSKDKSVRNSGYAAPEYVENGKVSNKTDVYSFGVVLLELISGRRATDKLPGGKSLVDWARPLLGGKKYPKLVDLKISNSYEEEKLLWLVQVTEQCLRKNPKERITMNMVVSSLQGIEESAEYSVIEDSPPENSCLPHDEPAMISTQGQMKADPVKQEQEWIGRNQYEEERSLRLTVITNDIIGQRNADQLIQGGEDVQSSPHEEMSRVTVISNDVIDEKNSNQKIQEKLQIKGSCDEGLKNANEAKVILENSKSSVCSICRSRRPYSGLQKKYTYEELEAATEGFSIKYSLCEGEYGPAFRGQLENNQEIVIKQHTFTSLQEQKVFISEFQLLINARHENVIMLLGSCIRLSQLLIVYEKACNGSLDQYLSRQSATSLTWGERVKVAIGVARGLKYLHENNIVHGGIKPSNILLNHEFKPMVGDFVFGKERCELKNVCKQKSIRNCGYTAPECQESEELSTEADVYSFGVVLVELIAGRMIADKILGQKCLVECVRSLLGRREYRQLVDPKVRSSYDEQELVSLFHITENCLKKNPKERFTMNMVVSALPCVANSNGLYVKEDFSPENSNVSDAKNSKGKLGSSFSKAKSVLELKLVSSTTLSFSLLRPRSLHFSLKFHASFSLKSPTSTFRAFSNADEDEEDDEEEDQDQDNVSADEYDDVLGEASDEADVFAWHSGFKWQRVDKLCNEVREFGADLIDVDELTSVYDFRIDKFQRQAILVFLRGFSVVVSAPTSSEKTLIAEAAVECEYLLTTAFHVVLVMFLLEVDL 1807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00465 1807 SUPERFAMILY Protein kinase-like (PK-like) 1299 1585 IPR011009 -
Gma20g00465 1807 Gene3D - 1711 1800 IPR027417 -
Gma20g00465 1807 Gene3D Transferase(Phosphotransferase) domain 1 962 1169 - -
Gma20g00465 1807 Gene3D Transferase(Phosphotransferase) domain 1 1399 1608 - -
Gma20g00465 1807 Gene3D Transferase(Phosphotransferase) domain 1 461 668 - -
Gma20g00465 1807 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 314 667 - -
Gma20g00465 1807 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1253 1607 - -
Gma20g00465 1807 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 83 200 - -
Gma20g00465 1807 PANTHER OS01G0253100 PROTEIN 83 200 IPR045271 GO:0004714|GO:0006468
Gma20g00465 1807 ProSiteProfiles Protein kinase domain profile. 886 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00465 1807 MobiDBLite consensus disorder prediction 249 271 - -
Gma20g00465 1807 ProSiteProfiles Protein kinase domain profile. 384 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00465 1807 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 648 1236 - -
Gma20g00465 1807 PANTHER OS01G0253100 PROTEIN 314 667 IPR045271 GO:0004714|GO:0006468
Gma20g00465 1807 PANTHER OS01G0253100 PROTEIN 648 1236 IPR045271 GO:0004714|GO:0006468
Gma20g00465 1807 MobiDBLite consensus disorder prediction 1670 1692 - -
Gma20g00465 1807 MobiDBLite consensus disorder prediction 667 696 - -
Gma20g00465 1807 ProSiteProfiles Protein kinase domain profile. 1322 1589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00465 1807 SUPERFAMILY Protein kinase-like (PK-like) 870 1156 IPR011009 -
Gma20g00465 1807 Gene3D Phosphorylase Kinase; domain 1 1283 1396 - -
Gma20g00465 1807 Gene3D Phosphorylase Kinase; domain 1 851 960 - -
Gma20g00465 1807 MobiDBLite consensus disorder prediction 249 272 - -
Gma20g00465 1807 MobiDBLite consensus disorder prediction 667 685 - -
Gma20g00465 1807 Pfam Protein tyrosine and serine/threonine kinase 901 1150 IPR001245 GO:0004672|GO:0006468
Gma20g00465 1807 Pfam Protein tyrosine and serine/threonine kinase 1324 1586 IPR001245 GO:0004672|GO:0006468
Gma20g00465 1807 MobiDBLite consensus disorder prediction 1674 1692 - -
Gma20g00465 1807 Gene3D Phosphorylase Kinase; domain 1 357 459 - -
Gma20g00465 1807 SMART serkin_6 384 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00465 1807 SMART serkin_6 886 1148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00465 1807 SMART serkin_6 1322 1589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g00465 1807 SUPERFAMILY Protein kinase-like (PK-like) 369 667 IPR011009 -
Gma20g00465 1807 PANTHER OS01G0253100 PROTEIN 1253 1607 IPR045271 GO:0004714|GO:0006468
Gma20g00465 1807 Pfam Protein kinase domain 407 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00465 Gma-Chr20 8986287 9007933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00465 372 652 Trihelix Transcription Factor Family AT5G38560 37.415 2.67e-52 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma20g00465 PK_Tyr_Ser-Thr 4.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00465 - - gsj:114401847 3226.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02590 02 51902702 51906935 Gma20g00465 20 8986287 9007933 PCT