Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00456 ATGGCCTTAGCTATGGTGGGAGAGGCACTTATCTCTGCTTCTGTGGAGATCTTGTTGGATAGGATAACTTCTGCGGAGTTTCGAGATTTCTTTGCCAATAGAAAGCTGAATGTGTCTCTCTTGGACGAGCTGAAGATAAAGCTGTTGACACTCAATGCTGTGCTCAATGATGCTGAGGAGAAACAGATCACTAATTCAGCAGTGAAGGCATGGCTTAATGAGTTGAAAGATGCTGTTCTAGACGCTGAGGATTTGTTGGATGAAATCAACACAGATTCTCTGAGGTGCAAGGTGGAGGGAGAATTTAAAACCTTTACTAGCCAGGTGAGGTCATTACTTTCTTCTCCCTTTAATCAATTCTATAGGAGCATGAATTCCAAGCTTGAAGCAATATCTAGAAGGCTAGAAAATTTTCTTAAACAGATAGATAGTCTCGGTTTGAAAATTGTCGCTGGCAGAGTCTCTTACAGAAAAGATACAGATCGATCGGTGGAATATGTTGTTGCAAGAGACGATGACAAAAAGAAGCTGTTGAGCATGCTTTTCTCTGATGAAGATGAGAATAATAATCACATACAAGTGCTGACAATATGGGGCATGGGAGGTCTTGGAAAAACAACCCTTGCTCAGAGCCTTTTAAATGATGATGCAGTGCAGAACCATTTCGATCTCAAAGCTTGGGCATGGGTATCTGATCCTTTTGATGTGTTTAAGGCAACAAAGGCAATTGTTGAATCTGCCACTTCTAAAACTTGTGATATTACTAATTTTGATGCTCTTCGTGTTGAATTGAAGAACACCTTTAAAGATAAAAAATTTTTGCTTGTGCTCGATGACCTTTGGAATATGCAGTATCATGATTGGGATCAACTAATAGCCCCTTTTAGCTGTGGGAAAAAGGGAAGCAAAATCATTGTGACAACCCGACATCACAGAATTGCAGAAATCACTCGTACATTTCCCATTCATGAGCTGAAGATTCTTACGGATGACAACTGTTGGTGTATACTTGCTAAACATGCATTTGGAAATCAAGGATATGACAAATATCCAATCCTAGCAGAAATTGGTAGACAAATTGCAACAAAATGCAAGGGTCTACCATTAGCAGCCAAAACATTGGGAGGTCTTTTGCGATCAAATGTTGATGCAGAGTATTGGAATGGAATTCTGAACAGCAACATGTGGGCAAATAATGAAGTTTTAGCAGCTTTATGCATAAGTTATCTTCATCTTCCACCACATCTGAAAAGATGTTTTGCCTATTGCTCAATTTTTCCAAGACAATATTTGTTGGATAGGAAGGAATTGATTCTGTTATGGATGGCTGAAGGCTTTCTTCCACAAATCCACGGAGAGAAAGCAATGGAATCAATAGGTGAAGATTACTTTAATGAATTGTTATCTAGATCTTTAATTGAAAAAGACAAAAATGAGGGAAAGGAACAATTTCAAATGCATGACCTTATTTACAATTTAGCCAGACTAGTCTCTGGTAAGAGATCTTGTTACTTTGAAGGAGGAGAAGTCCCATTAAATGTTCGCCATTTGACATATCCTCAAAGAGAGCATGATGCCTCTAAAAGATTTGAGTGTTTGTATGAGCTAAAGTTTTTGCGCAGCTTTTTACCACTATATGGATATGGATCTTATCCTTATTGTGTATCCAAAAAGGTGACTCATGATTGGCTGCCAAAACTAACATATCTGCGAACATTGTCCTTGTTTAGCTACAGAAATATCACTGAGCTGCCTGATTCAATAAGCAATTTGGTACTATTGCAGTATCTTGACCTTTCCTATACTTCCATCAAAAGTTTGCCTGATGCAGCCTTTAGGCTTTACAATTTGCAGACTTTGAAATTATCAAATTGTGAATCTCTTACGGAGTTGCCTGAACAGATAGGAGATTTGTTACTCTTACGGTATCTTGACTTTTCCTATACTTCCATCAATCGGCTGCCTGAACAGATAGGAAATTTGGTCAATCTACGCCACCTTGATATTAGAGGCACAAATTTGTGGGAGATGCCATCACAAATAAGCAAGCTACAAGATCTCCGTGTGTTGACTTCTTTTGTTGTAGGCAGAGAAAATGGAGTAACTATAAGAGAATTAAGAAAGTTTCCTTACTTGCAAGGTACGCTTTCCATTTTGAGGCTACAAAATGTTGTTGATCCCAAGGATGCTGTTCAAGCTGACTTAAAGAAGAAAGAGCACATTGAGGAGCTTACGCTGGAGTGGGGCAGTGAGCCACAAGATTCACAAATTGAGAAAGACGTACTTCAGAACCTGCAACCATCGACAAATTTAAAGAAACTCAGCATAAGATACTACAGTGGCACAAGCTTTCCTAAATGGTTGAGTTACTATTCGTATTCTTATGTTATAGTCCTTTGCATCACTGATTGCAACTATTGTTTTTCACTTCCACCATTTGGACAACTACCTTCTCTCAAGGAGCTTGTGATAGAAAGGATGAAAATGGTGAAGACAGTTGGTGAGGAATTCTACTGCAACAATGGGGGTTCTCTTTCATTTCAACCATTTCCATTGTTGGAGAGTATCCAGTTCGAAGAGATGTCAGAGTGGGAAGAGTGGCTACCATTTGAAGGTGAAGGCCGCAAATTTCCTTTTCCTTGCCTTAAGCGTTTGAGTTTATCAGAATGCCCCAAGTTGAGAGGAAACTTGCCCAACCATCTACCTTCATTGACAGAGGTTAGTATATCAGAGTGTAACCAGCTAGAGGCAAAATCGCATGATCTACATTGGAACACATCAATTGAAAAAATAAAGATTAGAGAAGCAGGAGAAGGCTTGTTGTCCTTGCTTGGCAACTTTTCTTATAGGAATATTCGGATTGAAAACTGTGACAGCTTGTCATCTTTGCCAAGAATAATACTAGCTGCCAATTGTCTCCAAAGTTTGACTCTTTTTGATATCCCCAATTTGATTTCCTTCTCAGCTGATGGTTTGCCAACGTCATTGCAATCGCTTCACATTTCCCACTGTGAGAACTTAGAATTTCTGTCTCCCGAATCATCGCACAAATACACATCACTTGAATCTCTGGTAATTGGCAGAAGCTGTCATTCCCTGGCGTCCTTACCATTAGATGGTTTCTCTTCCCTGCAATTTCTTCGTATCGAGGAATGTCCCAACATGGAAGCAATTACTACTCATGGTGGAACGAATGCTCTCCAATTAACTACACTTGATGTTTGGAATTGTAAGAAACTTAGGTCACTTCCAGAGCAGATTGATCTTCCTGCCCTTTGTCGGTTATACCTTAATGAGCTTCCAGAGCTAACATCATTGCCCCCAAGGTGTTTGCCTTCCAGTTTACAAACACTTGAAGTTGATGTTGGAATGCTATCATCAATGTCTAAACACGAGTTAGGTTTCTTATTCCAACGCCTCACTTCTCTGTTTCGTCTTTCCATTACTGGTTTTGGGGAGGAAGATGTTGTTAACACCCTGTTGAAGGAGTGCTTACTGCCCACTTCCCTGCAATATCTGTCCCTACGGAATTTATATGATTTAAAGTTGTTGGAAGGAAAAGGGCTTCAACATCTCACTTCCCTCACAGAGCTTGCCATCTGGAATTGTAAAAGCCTAGAGTCCTTGCTCGAAGATCAGCTTCCATCCTCTCTTGAATTACTGGAGATAAGTAGTTGTCCTTTACTAGAAGCAAGGTATCAAAGTCGGAAAGGGAAACACTGGTCTAAGATTGCTCACATTCCTGCTATCAAGATAAATGGTGAAGTGATAATATGA 3777 0.3974 MALAMVGEALISASVEILLDRITSAEFRDFFANRKLNVSLLDELKIKLLTLNAVLNDAEEKQITNSAVKAWLNELKDAVLDAEDLLDEINTDSLRCKVEGEFKTFTSQVRSLLSSPFNQFYRSMNSKLEAISRRLENFLKQIDSLGLKIVAGRVSYRKDTDRSVEYVVARDDDKKKLLSMLFSDEDENNNHIQVLTIWGMGGLGKTTLAQSLLNDDAVQNHFDLKAWAWVSDPFDVFKATKAIVESATSKTCDITNFDALRVELKNTFKDKKFLLVLDDLWNMQYHDWDQLIAPFSCGKKGSKIIVTTRHHRIAEITRTFPIHELKILTDDNCWCILAKHAFGNQGYDKYPILAEIGRQIATKCKGLPLAAKTLGGLLRSNVDAEYWNGILNSNMWANNEVLAALCISYLHLPPHLKRCFAYCSIFPRQYLLDRKELILLWMAEGFLPQIHGEKAMESIGEDYFNELLSRSLIEKDKNEGKEQFQMHDLIYNLARLVSGKRSCYFEGGEVPLNVRHLTYPQREHDASKRFECLYELKFLRSFLPLYGYGSYPYCVSKKVTHDWLPKLTYLRTLSLFSYRNITELPDSISNLVLLQYLDLSYTSIKSLPDAAFRLYNLQTLKLSNCESLTELPEQIGDLLLLRYLDFSYTSINRLPEQIGNLVNLRHLDIRGTNLWEMPSQISKLQDLRVLTSFVVGRENGVTIRELRKFPYLQGTLSILRLQNVVDPKDAVQADLKKKEHIEELTLEWGSEPQDSQIEKDVLQNLQPSTNLKKLSIRYYSGTSFPKWLSYYSYSYVIVLCITDCNYCFSLPPFGQLPSLKELVIERMKMVKTVGEEFYCNNGGSLSFQPFPLLESIQFEEMSEWEEWLPFEGEGRKFPFPCLKRLSLSECPKLRGNLPNHLPSLTEVSISECNQLEAKSHDLHWNTSIEKIKIREAGEGLLSLLGNFSYRNIRIENCDSLSSLPRIILAANCLQSLTLFDIPNLISFSADGLPTSLQSLHISHCENLEFLSPESSHKYTSLESLVIGRSCHSLASLPLDGFSSLQFLRIEECPNMEAITTHGGTNALQLTTLDVWNCKKLRSLPEQIDLPALCRLYLNELPELTSLPPRCLPSSLQTLEVDVGMLSSMSKHELGFLFQRLTSLFRLSITGFGEEDVVNTLLKECLLPTSLQYLSLRNLYDLKLLEGKGLQHLTSLTELAIWNCKSLESLLEDQLPSSLELLEISSCPLLEARYQSRKGKHWSKIAHIPAIKINGEVII 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00456 1258 Coils Coil 41 61 - -
Gma20g00456 1258 Gene3D - 327 407 IPR042197 -
Gma20g00456 1258 Pfam Rx N-terminal domain 13 103 IPR041118 -
Gma20g00456 1258 Gene3D - 408 496 IPR036388 -
Gma20g00456 1258 Gene3D Ribonuclease Inhibitor 702 936 IPR032675 -
Gma20g00456 1258 Gene3D Ribonuclease Inhibitor 991 1087 IPR032675 -
Gma20g00456 1258 Gene3D Ribonuclease Inhibitor 1088 1237 IPR032675 -
Gma20g00456 1258 Pfam NB-ARC domain 174 391 IPR002182 GO:0043531
Gma20g00456 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 423 IPR027417 -
Gma20g00456 1258 PANTHER - 621 943 - -
Gma20g00456 1258 PANTHER - 51 628 - -
Gma20g00456 1258 CDD RX-CC_like 13 89 IPR038005 -
Gma20g00456 1258 PANTHER DISEASE RESISTANCE PROTEIN RP 51 628 IPR044974 GO:0006952
Gma20g00456 1258 PANTHER DISEASE RESISTANCE PROTEIN RP 621 943 IPR044974 GO:0006952
Gma20g00456 1258 Gene3D - 151 320 IPR027417 -
Gma20g00456 1258 SUPERFAMILY L domain-like 485 931 - -
Gma20g00456 1258 Gene3D Ribonuclease Inhibitor 553 694 IPR032675 -
Gma20g00456 1258 Coils Coil 68 92 - -
Gma20g00456 1258 PRINTS Disease resistance protein signature 194 209 - -
Gma20g00456 1258 PRINTS Disease resistance protein signature 267 281 - -
Gma20g00456 1258 PRINTS Disease resistance protein signature 364 378 - -
Gma20g00456 1258 PRINTS Disease resistance protein signature 612 628 - -
Gma20g00456 1258 Gene3D - 38 134 - -
Gma20g00456 1258 SMART LRR_typ_2 1089 1113 IPR003591 -
Gma20g00456 1258 SMART LRR_typ_2 638 660 IPR003591 -
Gma20g00456 1258 SMART LRR_typ_2 591 614 IPR003591 -
Gma20g00456 1258 SMART LRR_typ_2 661 684 IPR003591 -
Gma20g00456 1258 SUPERFAMILY L domain-like 950 1244 - -
Gma20g00456 1258 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00456 Gma-Chr20 8793951 8798941 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00456 581 701 WRKY Transcription Factor Family AT4G12020 37.589 2.16e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00456 - - gmx:100800462 2476.82