Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00453 ATGTCCACCATCACGGCTTCTTACAATGTGACTCCGAATGAGCCAACTCCAAACGTTTCTTTGTGGCTTTCCGAGAGTGACCAAGTTGCACGTTGGAGTCACACCTCCACCATCTACATTTACAAAGAAAACCAAACCCAAAACGCCCTTGAGAGAATGAGGGATTCTCTAAGCAAAATTCTTGTGCACTACCACCCTTTGGCCGGTCGATTGACTTGGTTAGAGGGTGGTAAAGTAGCACTGAATTGCAATGGAAAGGGAGTGACATTGATTGAAGCCGAATCACAAAAAACAATGGATGATTATGGCGATTTTGCGCCGAGCGAAAAGCTGAAGAATGAACTCATTCCTCCGGTTGATTACTCTCAACCCATTGAGGAGCTTCCCTTGTTGCTTGTTCAATTAACAAGGTTCAAAAAAGGAAGCAGCAACAATAATAATAATAACCAATTAGGCCTTGCAATTGGAGTGGCTTTTTGCCATGTTTTGTGTGATGGGTTAGCAGCCATAAGGTTCATTAATGCATGGGCAAAGCTTACTAGAGGGGAAGTGTTGGACTCAATTGAAATGTTTCCGTTTCTTGATAGAACAATCATGAATTCCACATACCCACCAAGGGCTCCACGTTTTGATCACCCTGAGTTGAAGCCTCTGCCTCTCAAACTAGGCACCACTGACACCATAGAAGAACAGAAAAAGGAGAAAACTGCTGTGATTTTGAGACTCACTTCACAGCAAGTGGAGAAATTGAAGAAGAAAACCAATGATGAACGACCTCAAAAAGAAGGTATTACAAAAACGTTACGACCATATAGTAGATACGAAGTTATTGCATCACACATATGGAGATGTGCATCAAAGGCACGTGAGCTAGAAGATCTTCAACCAACCGTGGTAAGGGTAAGTGCGGACATTCGCAATAGGCTAAACCCTCCCCTCCCAAGAAACTACTTTGGCAACGCATTGGCCGTGGCATTGACACCAAAATGTCACACTAAGGAACTCATAACAAACCCATTAAGCCACGGTGCCCAAAAGATTAGGGAAGCAATTGAGTTGCTAAATGATGAGTACATAAGGTCACAATTGGACTTCATTAGGTGCCATGAGCAATTGGATAGGATAAGGGCCTCGTATTTGGACCAAGGGGAGCCAAAAAATGCACCCTTTTATGGAAACCCTAATCTCACTATTGTGAGTTGGATGAGCATGCCCGTTTATGAGGCTGATTTTGGGTGGGGGAAGCCGGGGTATTTTGGTCCTGGTGCTGTGTACCCTGATGGAAAGGCTTACATTATTCGAAGCTCGGATGAGGATGGCTCACTCGTTGTGTCGGCTCACTTGCAAACAGCACACAAGGAGCTTTTCAAAAAGTTCTTCTATGAGGACATATGA 1395 0.4401 MSTITASYNVTPNEPTPNVSLWLSESDQVARWSHTSTIYIYKENQTQNALERMRDSLSKILVHYHPLAGRLTWLEGGKVALNCNGKGVTLIEAESQKTMDDYGDFAPSEKLKNELIPPVDYSQPIEELPLLLVQLTRFKKGSSNNNNNNQLGLAIGVAFCHVLCDGLAAIRFINAWAKLTRGEVLDSIEMFPFLDRTIMNSTYPPRAPRFDHPELKPLPLKLGTTDTIEEQKKEKTAVILRLTSQQVEKLKKKTNDERPQKEGITKTLRPYSRYEVIASHIWRCASKARELEDLQPTVVRVSADIRNRLNPPLPRNYFGNALAVALTPKCHTKELITNPLSHGAQKIREAIELLNDEYIRSQLDFIRCHEQLDRIRASYLDQGEPKNAPFYGNPNLTIVSWMSMPVYEADFGWGKPGYFGPGAVYPDGKAYIIRSSDEDGSLVVSAHLQTAHKELFKKFFYEDI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00453 464 Pfam Transferase family 3 461 - -
Gma20g00453 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 464 - -
Gma20g00453 464 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 3 464 - -
Gma20g00453 464 Gene3D - 223 462 IPR023213 -
Gma20g00453 464 Gene3D - 3 217 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00453 Gma-Chr20 8725029 8727276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00453 4 462 Monolignol Biosynthesis Gene Families AT5G48930 36.659 2.35e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00453 K13065 - gmx:100787038 924.85