Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00440 ATGGAGCTGAGAACTTACCACAAGAACTACCAGGTTGAAACATGGAGCAAGATTCTGAGTTCTCTTAGCCCTAAAGGTTTGAACGAGAATGGGAAAGTGCATAAGTCGATGCTGAAAGAGCGGTTCAAGAGCTTAAACATGGTGTTTGAGAAGATTCACAAGACGCAAAATGCGTGGGTGGTGTACAACGAACAACTTCGGGTAGATATGGAATCGAAAGTTTGA 225 0.4311 MELRTYHKNYQVETWSKILSSLSPKGLNENGKVHKSMLKERFKSLNMVFEKIHKTQNAWVVYNEQLRVDMESKV 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00440 74 Gene3D Exocyst complex component Exo70 1 74 - -
Gma20g00440 74 SUPERFAMILY Cullin repeat-like 3 70 IPR016159 -
Gma20g00440 74 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 70 - -
Gma20g00440 74 Pfam Exo70 exocyst complex subunit 3 73 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma20g00440 74 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 70 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00440 Gma-Chr20 8528034 8528258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00440 2 70 EXO70 exocyst subunit family AT5G13990 59.420 1.04e-22 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00440 K07195 - gmx:100819960 124.02