Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00437 ATGGTGGCGGGGCACACTACTGCGACTGAGGCGTTGATTAGTGAAGCGCCCGAGTTGAGATGCTGGAAAGTTACAACAATGCTGGATTCCGTGATTGAGGTTGGTGCGACAAGGGTGATGGTGAAGTGCGGCGAGAGTGACAACGGTTTTGTTGGAAACCTTGAGAAGGAGCAGAGAAGCTATGCTGGGGAAGAAGGTTCTATGTTAATGTTGTTGGAGGGAGAAATTGGGGTTGGAGTAGAAGGATCAGAGCTGGGAGGGGATGGACATGGAGGAGCCGGAACCATAAAGGAAGCTTACAACATTGGCGGTCATATCATAAGTGCAAATGCAATAGAACAAGCGATATTTTGCTTCCAAACACCCCACATTGGTCGGATTTTCAATGGTGTATTTCTCAAAGGTAACAAAGCCACAATGAACATGCTGCACATAGTTGAGCCCTATGTGACTTATGGATACCCAAATCTTAAGAGTGTGAAAGAACTTCTTTACAAGAGAGGGTATGGAAAGCTAAACAAGCAAAGGACTTCTCTAATTGACAACTCCATCATTGAGCAGGCTATTGATGTTTCCAAATGCCAGGAAAAAGTAAGAGAAACACCAGGCAATATTGAGAATTCTATGAAGCTGGAAGCAGCTGAAACAAAGCTGCAAGACCTGAAGACAAACATGGCCATATTGGGAAAAGAAGCAGCTGCCGCAATGGCTGCTGTAGAAGCACAGCAACAAAGGTTAACCCTCCAGCATCTTATAGCTATGATAATATCAGAACGACAACAAAGTAAAGCCCCTCTTACACCTAGTGTGGATAACAACATGACACCACCCCCATCATATGAAAAAGTAAATGGTGTATGTGCTTATCAAGCACATAATGGCTCAACAGATAGTATGGGTTACTTCTTAGGAGAGGTTTTATTTCCCTACCATGGTGAGTTTGAAGTTGAATTGAATCTATTAGTTGAATTGACCCAGACCCACAATGAGTCACAAAGCAACCCACAGATGGGCAAAGCTGATTCTATTGCTTCGAATCCAATATGGGCTTTTAATGCAGCCAGGAAAGGCATTCCTGTGAGTTCAAAACCCAACAAAAGTACCTTAAATGAATTGATCACTCTTCAAAAAGCATTCAATTCCAAAGGAGGTTGA 1155 0.432 MVAGHTTATEALISEAPELRCWKVTTMLDSVIEVGATRVMVKCGESDNGFVGNLEKEQRSYAGEEGSMLMLLEGEIGVGVEGSELGGDGHGGAGTIKEAYNIGGHIISANAIEQAIFCFQTPHIGRIFNGVFLKGNKATMNMLHIVEPYVTYGYPNLKSVKELLYKRGYGKLNKQRTSLIDNSIIEQAIDVSKCQEKVRETPGNIENSMKLEAAETKLQDLKTNMAILGKEAAAAMAAVEAQQQRLTLQHLIAMIISERQQSKAPLTPSVDNNMTPPPSYEKVNGVCAYQAHNGSTDSMGYFLGEVLFPYHGEFEVELNLLVELTQTHNESQSNPQMGKADSIASNPIWAFNAARKGIPVSSKPNKSTLNELITLQKAFNSKGG 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00437 384 Coils Coil 211 231 - -
Gma20g00437 384 SUPERFAMILY Ribosomal protein L30p/L7e 123 198 IPR036919 -
Gma20g00437 384 PANTHER SH3 DOMAIN-CONTAINING 181 255 - -
Gma20g00437 384 PANTHER SH3 DOMAIN-CONTAINING 255 322 - -
Gma20g00437 384 Gene3D - 101 190 IPR036919 -
Gma20g00437 384 PANTHER PROTEIN, PUTATIVE-RELATED 181 255 - -
Gma20g00437 384 PANTHER PROTEIN, PUTATIVE-RELATED 255 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00437 Gma-Chr20 8333558 8348733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00437 118 187 Cytoplasmic Ribosomal Protein Gene Family AT2G01250 74.286 2.30e-30 113