Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00425 ATGGTTAAGGTCTGGAAGCCATGGTGTGTTTTGATTTCTGTGCTGCATTTGTTCCTCCACACCACATCTTCTGATTTCATCGTCAAGAATCTACCAGGTTTTGGGGATCTTCCGTTCACATTGAATACTGGATACATTGGTGTTGGACAAAGAGAAGAGGTGCAGTTATATTATTACTTTGTTGAATCTCAAAGGAGTCCTTTGAATGATCCTCTTCTACTTTGGCTTGTTGGAGGTCCTGGTTGCTCTGCCCATTCTGCTTTCTTCTATGAAAATGGGCCATTAATGTTTAATTTTCACGATTTTAATGGGAGTTTTCCACAGCTTCTATTGAATCCGCACACTTGGACAAAGGTACTCAACATATTATATGTGGATGCACCTGTTGGTACGGGATATTCTTACTCTAAAACACAAGAAGGCTATTATAGCAATGACGAACAATTGGTGGAACACATGTATGATTTTTTCCATAAGTGGCTGGTGGATCACCCTGAATTCAGATCGAATCCACTTTACATTGGTGGTGGTTCTTATTCTGGCATAGTTGTTCTTCCCCTGGTTCAGAAAGTATACGAAGATTATGAAACTGGACGCTCACCAATCCTGAACATCCAAGGCCTTGTGCTTGCAAGTCCAAGACTTGACTCTTTCATGGACAATAACACAAAAGTTGAATTCGCTCACCAACGAACACTTATATCAAATGAACTATACGAGTCAATTAAATCTAATTGCAATGGTGATTATGTTAATCTTGATCCTAACAACACAAAATGTATGTCAGATTATGAAGCCTACACTGAGTTAGTTCGTTACATAAATGAATATCAAATTTTGGAACCAAGTTGTGTGATTGCACCTAAGGAGAATCAAAGAATTCTTTCTCAAGAATTAAATTATATCCACCAAACTAAATTTAGGTGTCGGGATGACTTATATGCAATTGGAGAATTATGGGCAAATGATCCACATGTTCAGAAGGCTCTTCAAGTTAGAGAGGGAACAAAAGATCACTTCCAACGATGCAATCGCAGCGCTGCATATACATGGAACGTTCCTAGTGTGGTTCAATACCTTCATAATCTTACAAACACAAACATGCGATCTCTAATTTATTGA 1122 0.3841 MVKVWKPWCVLISVLHLFLHTTSSDFIVKNLPGFGDLPFTLNTGYIGVGQREEVQLYYYFVESQRSPLNDPLLLWLVGGPGCSAHSAFFYENGPLMFNFHDFNGSFPQLLLNPHTWTKVLNILYVDAPVGTGYSYSKTQEGYYSNDEQLVEHMYDFFHKWLVDHPEFRSNPLYIGGGSYSGIVVLPLVQKVYEDYETGRSPILNIQGLVLASPRLDSFMDNNTKVEFAHQRTLISNELYESIKSNCNGDYVNLDPNNTKCMSDYEAYTELVRYINEYQILEPSCVIAPKENQRILSQELNYIHQTKFRCRDDLYAIGELWANDPHVQKALQVREGTKDHFQRCNRSAAYTWNVPSVVQYLHNLTNTNMRSLIY 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00425 373 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 10 372 - -
Gma20g00425 373 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 372 IPR001563 GO:0004185|GO:0006508
Gma20g00425 373 Gene3D - 309 373 - -
Gma20g00425 373 SUPERFAMILY alpha/beta-Hydrolases 28 373 IPR029058 -
Gma20g00425 373 Pfam Serine carboxypeptidase 36 373 IPR001563 GO:0004185|GO:0006508
Gma20g00425 373 Gene3D alpha/beta hydrolase 24 286 IPR029058 -
Gma20g00425 373 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Gma20g00425 373 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Gma20g00425 373 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00425 Gma-Chr20 8119533 8134140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00425 307 373 Calmodulin-binding Proteins AT2G22960 35.821 1.05e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00425 K16296 - gmx:100791997 785.793