Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00422 ATGGTTGAACCTAGAACTATAGTTCCTTTATCCTCTATTGTTCATCACCACTATCTTGCATCTCCACTAGCAAAGAAAAAAGTTGGTAGGCCCCTAGGCTCAAAGAACAAGCCAAAGCTATCCCATGTGATTAGCCAAGCCAATGTGCAAGTCCAAAAACCCATTTACATTGAAGTCCCTAATAACTTGGATGTGATTGAGGCAATGGTCCAATTTGCTCATCACCACAAAGTCAGTATCACAGTGCTAAGCGCATCAGGAACTATTGCCAGTGTCACTCTTAATTACACTGATTCTTATGCTTCTACTTTCACTCTTTATGGACCTTTCTCATTAATTTCCCTTACTGGAACCTATATTAATAATACCGCTATCTCTAGTTCTTCATCGTCATGTAATCTTGATCACCCTTGTTGTTTTAGGATTTCCTTTTCTACAATTTCAGGTCAAAGCATTATTGGGTTTGTTAGAGGAAAGCTTGTGGCAGCTAATGGGGTTATTGTGATGGCTACTATTGTCAACAACCTTGAGGTTCACAAGGATGTGATCAATAACAATAGTAAAGAATGGGATGATGATAACAATAACCCTAACACATATATATGA 606 0.3828 MVEPRTIVPLSSIVHHHYLASPLAKKKVGRPLGSKNKPKLSHVISQANVQVQKPIYIEVPNNLDVIEAMVQFAHHHKVSITVLSASGTIASVTLNYTDSYASTFTLYGPFSLISLTGTYINNTAISSSSSSCNLDHPCCFRISFSTISGQSIIGFVRGKLVAANGVIVMATIVNNLEVHKDVINNNSKEWDDDNNNPNTYI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00422 201 Gene3D - 53 191 - -
Gma20g00422 201 SUPERFAMILY AF0104/ALDC/Ptd012-like 51 180 - -
Gma20g00422 201 Pfam Plants and Prokaryotes Conserved (PCC) domain 53 173 IPR005175 -
Gma20g00422 201 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 191 - -
Gma20g00422 201 ProSiteProfiles PPC domain profile profile. 49 193 IPR005175 -
Gma20g00422 201 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 191 IPR014476 GO:0003680
Gma20g00422 201 CDD DUF296 53 172 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00422 Gma-Chr20 8037304 8037909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00422 25 180 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.625 1.29e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00422 - - gmx:100790942 382.104