Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00416 ATGGCAGAAATCGCAGTGTCATCCGCACTAGACAAATTACTTCCACTAATAGCAGATGAAGCAAATCTGCTACGGGGCATCTCCAAAGAATTCGCAGACATAAAAAAAGAACTAGAATACATTCAAGCTTTCCTCAAGGATGCAGATAGAAAGGCAGCAGCAGAAGGAGACAACACAGACGATAGAATCAAAATATGGGTGAAAGAGTTGAGGGAAGCATCTTTTTCCATAGAAGATGTCATCGATGAATACATGATCCTTGTGGAACAACAGCCTCGTGATCCTGGATGTGCAACTTCACTCTGTAAGGTCATTCACTTTATTAAAACATTGATGCCTCGTCGTCAAATAGCATCAAAGATTAAGCAGGCCAAGTCATCAGTTCATGGAATCAAGCAAAGAGGTGTGGATTATCACTTCCTAATCCATTCTTCTCTTCAACTAGGACCAAGCAGATACAGAGGTAGCCATAATAATGTCCAATGGCATGACCCTCGAATGCATTCCCGTTACCTTGACGAAGCTGAAGTTGTTGGCCTTGAAGACACAAGAGATGAATTGATTGGTTGGTTAGTGGAGGGACCGGCAGAGCGAACTGTCATCTCTGTGGTAGGAATGGGAGGACTCGGAAAAACCACTCTTGCTGGCAGAGTTTTCAACAACCAGAAGGTGATTTCACACTTTGATTACCACGCATGGATCACGGTGTCTCAATCCTACACTGTGGAAGGGTTGATGAGGAACTTGCTGAAGAACTTATGCAAAGAAAAAATGGGGGATCTTCTTGAAGGTATTTCTGAAATGGATCGAGATTCATTGATTGATGAAGTGAGAAACCATTTGAAACAAAAGAGGTACGTTGTCATTTTTGATGATGTATGGAGTGTAGAACTTTGGGGTCAAATTGAAAATGCCATGTTTGATAATAACAATGGAAGTAGAATATTAGTCACAACTAGGATGGAAGGTGTTGTAAACTCTTGTAAGAAATCTCCTTCTGATCAGGTGCATAAGCTGGAACCTTTGACTAAACAAGAATCCATGGAACTCTTTTGCAAAATGGCATTTCGATGTCACAATAATGGACGTTGTCCAGAAGAACTCAAGAAAATTTCTACAGACTTTGTTGAAAAATGTAAGGGCTTACCATTGGCAATTGTAGCTATTGCCAGTCTTTTATCTGGCAAAGAAAAGACTCCATTTGAATGGGAAAAGATTAGGCGAAGCCTGAGTTCAGAGATGGACAAAAATCCACATTTAATTGGTATAGCAAAGATTTTAGGTTTTAGTTATGATGATTTGCCACACTACCTAAAATCATGCTTATTGTATTTTGGAGTATATCCTGAGAACTATGAAGTTAAATCGAAAAGATTATTTCGACAATGGATAGCTGAAGGATTTGTAAAAGATGAAGAAGGAAAAACTTTAGAGGACGTTGCAGAACAATATTTAACAGAGTTAATTGGTACAAATTTAGTGCAAGTCTCTTCATTCACCACAGATGGCAAAGCTAAGAGTTGTCGTGTTCATGACTTAATACATGATATGATCCTTAGAAAATTCAAGGATTTAAGTTTTTGCCAGCATATCAGTAAAAAAGATGAGTCGATGTCAAGTGGGATGGTTAGGCGCTTGTCAATAGAAACAATTTCCAATGATTTAATGGGGAGCTCTAAAAGCTTACATGCCAGGTCATTGCTCATTTTTGCAGATGAAAATGAAGCATGGAATACCAACTTTGTGCAAAGAATTCCTACAAAATACAAGCTACTGAAGGTATTTGATTTTGAAGATGGTCCATCGCATTATATCTCTATTCATGAAAATTGGGGAAATCTCGCACACTTGAAGTATTTAAACTTAAGAAATTCAAATATGCCAAGTCTGAAATTCATTGGCAAACTCCAGAACCTCGAGACCTTGGACATAAGGAATACATCTATCAAGAAATTGCCAAAGGAGATTCGCAAGCTAAGAAAGCTACGACATCTTTTGGGTGATGATATGAAATTGTTTCAATTGAAGAATTGTCTCGGAGGCCTGACATCCCTACAAACGTTGCGTCATGTAAAGCTAACTATGGAGAATGATGATGGAGTAGAGTTAATAAGAGAATTGGGAAAGCTGAAGCAGTTAAGAAACTTTTGCTTGACTGGTGTCAGAGAAGAACAGGGAAGCGCTCTATGTTCCTCAATAAGTGAGATGACAAACTTGGAGAAACTACGTATCGAGTCATACGGAGTTCAAGTCATTGATTTGCCTTTTATTTCATCTTTGCCTATGCTTCGGAAGCTTAGCCTATTTGGGAAGCTAAAAAAGCTTCCAGAGTGGGTTCCACAACTCCAAAATCTCGTAAAATTATCTTTGGAATACTCAGAGTTAACCAATGATCCATTGAAATCACTACAAAATATGCCATATTTGTTGTTCCTCGGCATGTACAAGGCTTATAAAGGAGAAAGTTTGTATTTTGAAGATGGAGGATTTCAACAACTAAGGGAACTGTCTCTTGGAGGATTGCGTAACTTGGAATCCATCATTATCGATAAAGGAGCACTCCATTCTCTGAAAAAGCTCAAATTTTGGGGAATACGCAAACTCAAGAAAGTACCTCCTGGCATTCAACACTTGAAAAAACTGGAAGTTCTTGATATCCGTAATATGCCATATGAATTCAATGAGTGCATTGCTCCCGATGGGGGACCAGAGCACCCAATCATCCAGCATGTGGGCCTTGTTGAAATTACTACTGACTTCGCACAAACTCGCATTATTTCTCACTTATCAACGCATTAA 2799 0.3887 MAEIAVSSALDKLLPLIADEANLLRGISKEFADIKKELEYIQAFLKDADRKAAAEGDNTDDRIKIWVKELREASFSIEDVIDEYMILVEQQPRDPGCATSLCKVIHFIKTLMPRRQIASKIKQAKSSVHGIKQRGVDYHFLIHSSLQLGPSRYRGSHNNVQWHDPRMHSRYLDEAEVVGLEDTRDELIGWLVEGPAERTVISVVGMGGLGKTTLAGRVFNNQKVISHFDYHAWITVSQSYTVEGLMRNLLKNLCKEKMGDLLEGISEMDRDSLIDEVRNHLKQKRYVVIFDDVWSVELWGQIENAMFDNNNGSRILVTTRMEGVVNSCKKSPSDQVHKLEPLTKQESMELFCKMAFRCHNNGRCPEELKKISTDFVEKCKGLPLAIVAIASLLSGKEKTPFEWEKIRRSLSSEMDKNPHLIGIAKILGFSYDDLPHYLKSCLLYFGVYPENYEVKSKRLFRQWIAEGFVKDEEGKTLEDVAEQYLTELIGTNLVQVSSFTTDGKAKSCRVHDLIHDMILRKFKDLSFCQHISKKDESMSSGMVRRLSIETISNDLMGSSKSLHARSLLIFADENEAWNTNFVQRIPTKYKLLKVFDFEDGPSHYISIHENWGNLAHLKYLNLRNSNMPSLKFIGKLQNLETLDIRNTSIKKLPKEIRKLRKLRHLLGDDMKLFQLKNCLGGLTSLQTLRHVKLTMENDDGVELIRELGKLKQLRNFCLTGVREEQGSALCSSISEMTNLEKLRIESYGVQVIDLPFISSLPMLRKLSLFGKLKKLPEWVPQLQNLVKLSLEYSELTNDPLKSLQNMPYLLFLGMYKAYKGESLYFEDGGFQQLRELSLGGLRNLESIIIDKGALHSLKKLKFWGIRKLKKVPPGIQHLKKLEVLDIRNMPYEFNECIAPDGGPEHPIIQHVGLVEITTDFAQTRIISHLSTH 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00416 932 PRINTS Disease resistance protein signature 200 215 - -
Gma20g00416 932 PRINTS Disease resistance protein signature 280 294 - -
Gma20g00416 932 PRINTS Disease resistance protein signature 379 393 - -
Gma20g00416 932 PRINTS Disease resistance protein signature 634 650 - -
Gma20g00416 932 PANTHER DISEASE RESISTANCE PROTEIN RP 16 886 IPR044974 GO:0006952
Gma20g00416 932 Gene3D - 4 118 - -
Gma20g00416 932 Gene3D - 341 430 IPR042197 -
Gma20g00416 932 Gene3D - 168 335 IPR027417 -
Gma20g00416 932 Pfam Rx N-terminal domain 5 94 IPR041118 -
Gma20g00416 932 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 445 IPR027417 -
Gma20g00416 932 Pfam NB-ARC domain 181 432 IPR002182 GO:0043531
Gma20g00416 932 Gene3D - 431 522 IPR036388 -
Gma20g00416 932 Gene3D Ribonuclease Inhibitor 560 901 IPR032675 -
Gma20g00416 932 CDD RX-CC_like 2 132 IPR038005 -
Gma20g00416 932 SUPERFAMILY L domain-like 509 894 - -
Gma20g00416 932 PANTHER - 16 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00416 Gma-Chr20 7901242 7904040 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00416 176 400 WRKY Transcription Factor Family AT5G45050 24.779 4.68e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00416 K13457 - gmx:100789363 1864.74