Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00387 ATGGCAGCATGCTTGAATCCACCTAGGCTATCTAGCACCGAAGATGACTCTGTGATACTCTATTCAACTTCTAATTCTCCTGAAGAGTCCAACAGTCCTTCTTCTTCCTCTTTCTACCATTCACCACCACCATCACTATATCAATTCAGAACTGAAAACAAACTTTCTGTGAGAAATCTCTGCTACACTTTGCACCCTCATAAGACCACTCCCTTTTCATTTTGTCACCTGACTCAAAAACCAAAGCCAGTAAACATACTCAAGTCAGTCTCTTTTATTGCCAGAAGTTCTGAGATTGTTGCTGTTGTTGGTCCTAGTGGCACAGGAAAGTCCACCCTTCTGCGAATCATCGCCGGAAGGGTAAAAGATGAAGGTTTTAATCCTAAAAGTGTCTCAATCAATGATCAGCCTATGACTACTCCAGTTCAGTTGAGGAAGATATGTGGCTTTGTGGCACAAGAGGACAATTTGCTTCCCATGCTAACTGTGAAAGAAACTTTGTTGTTTAGTGCCAAGTTTAGGCTAAAAGAAATGACACCAAAGGATAGGGAATTGAGAGTAGAAAGCTTGTTGCAAGAGCTTGGCCTTTTTCATGTTGCTGATAGTTTTGTTGGAGATGAAGAGAATAGAGGGATATCAGGTGGGGAGAGGAAAAGGGTGTCAATTGGAGTTGACATGATTCACAATCCACCAATTTTGCTTCTAGATGAACCAACATCAGGTCTAGACAGCACTTCAGCTTTGCAAGTCATAGAGCTTCTCTCATCAATTGTTAAAGCAAAGCAAAGGACAGTGGTTCTTTCAATACACCAACCCAGCTATAGAATATTGCAGTATATTTCCAAGTTCTTGATCCTTTCTCATGGTTCAGTTGTTCACAATGGTAGCCTAGAACAGCTAGAGGAAACCATAAGTAAATTGGGATTTCAAATTCCAACACAACTGAATGCTTTAGAATTCTCCATGGAAATTATACGCGGGTTGGAAGATTCCAGTTCCAAATATGACACTTGCAGCATTGAGGAAATGGAGCCAATTCCAAACCTCATGTGGCCAGAGGAAGAAAACTGTGAAGTCCAAATTGTCCAATCGCAATGTAACAAGGGAAGTTTTGGCAGTCTTTTCTATGCAAACTTGATTGAGATATTGTTTCTCTGCTCAAGATTTTGGAAAATCATTTATAGAACAAAGCAGCTTTTCTTGGCCAGAACAATGCAAGCAATAGTTGGTGGCTTTGGGCTAGGAAGTGTTTACATAAAGATAAGAAGGGATGAAGGAGGAGTTGCTGAAAGATTAGGTCTATTTGCATTTAGTCTTAGTTTTCTCCTCTCTTCTACAGTTGAAGCACTTCCAATATACCTTCAAGAGAGGAGTGTTCTGATGAAAGAAGCCTCAAGGGGAGCCTATAGGATTTCCTCTTACATGATAGCCAACACTTTTGTCTTTCTTCCATTCTTGTTTGTAGTGTCTATACTTTTTGCTGTTCCTGTGTATTGGCTTGTAGGACTAAACCCTTCCCTTTCTGCCTTCACCTTCTTCACTTTTGTGGTGTGGCTCATTGTGCTCATGGCAAGTTCTTTGGTACTCTTCTTGAGTGCTGTCTCTCCTGATTTCATTTCAGGGAACTCTCTCATCTGCACAGTTCTTGGAGCCTTCTTCCTCTTCTCTGGATACTTCATCCCAAAGGAGAGCATTCCAAAGTATTGGATTTTCATGTACTATGTGTCTCTCTATAGGTACCCTTTGGATGCGCTCCTCACAAATGAGTATTGGAATGTTAGAAGTGAGTGTTTCTCACATCAAATAGAGGGATCACAGTGCTTGATCACTGGGTTTGATGTGTTGAAGAGTAGAGGACTTGAAAGGGATAACAGGTGGATGAATGTGGGAATAATGTTGGGATTCTTTGTGTTGTATCGTGTTCTTTGTTGGATAATACTTGCACGAAAGGCCTCCAAGACAACACTATAA 1971 0.4089 MAACLNPPRLSSTEDDSVILYSTSNSPEESNSPSSSSFYHSPPPSLYQFRTENKLSVRNLCYTLHPHKTTPFSFCHLTQKPKPVNILKSVSFIARSSEIVAVVGPSGTGKSTLLRIIAGRVKDEGFNPKSVSINDQPMTTPVQLRKICGFVAQEDNLLPMLTVKETLLFSAKFRLKEMTPKDRELRVESLLQELGLFHVADSFVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALQVIELLSSIVKAKQRTVVLSIHQPSYRILQYISKFLILSHGSVVHNGSLEQLEETISKLGFQIPTQLNALEFSMEIIRGLEDSSSKYDTCSIEEMEPIPNLMWPEEENCEVQIVQSQCNKGSFGSLFYANLIEILFLCSRFWKIIYRTKQLFLARTMQAIVGGFGLGSVYIKIRRDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERSVLMKEASRGAYRISSYMIANTFVFLPFLFVVSILFAVPVYWLVGLNPSLSAFTFFTFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWIFMYYVSLYRYPLDALLTNEYWNVRSECFSHQIEGSQCLITGFDVLKSRGLERDNRWMNVGIMLGFFVLYRVLCWIILARKASKTTL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00387 656 PANTHER ABC TRANSPORTER G FAMILY MEMBER 23 3 649 - -
Gma20g00387 656 Pfam ABC-2 type transporter 270 337 IPR043926 GO:0140359
Gma20g00387 656 ProSitePatterns ABC transporters family signature. 212 226 IPR017871 GO:0005524
Gma20g00387 656 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 72 313 IPR003439 GO:0005524
Gma20g00387 656 Pfam ABC-2 type transporter 382 590 IPR013525 GO:0016020|GO:0140359
Gma20g00387 656 Pfam ABC transporter 87 240 IPR003439 GO:0005524
Gma20g00387 656 Gene3D - 70 337 IPR027417 -
Gma20g00387 656 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 649 - -
Gma20g00387 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 306 IPR027417 -
Gma20g00387 656 SMART AAA_5 96 298 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00387 Gma-Chr20 7347700 7349691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00387 84 300 Calmodulin-binding Proteins AT2G36910 30.222 1.48e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00387 K05681 - gmx:100783883 1246.88