Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00381 atggccatgCCCGGTGAGCCATTTGTGAGGATCGTCATCATTAATGTCGACCCAAGTAAGGACATCATGGAGTCCATTCTTGATGCTGTTCACCTAGGTCGTGCCTACCTCACTATCCTTAACACCTTTGGCACAGTCACCATGGTGATCCTTCATAACTCGCTCCATGTCGTTGCCACCCTAACACTCCATGAGCCCTTCACCTTGCTTTGCCTCAACGGCTCATACTTATTGAACAACAATTTCAACCTTAACTTTAGAGCCATTATTCCCCCTCCTTTATCTTTTGGGATCCACCTCTCCACCTCTCGAGGCCAAGCCATTGGTGGTGCCATTGGCAGCCAAGTCATTGTCGATGGCAACGTTAAGATCACGCTCTGGACCTTTTGGCATCCTAAGATTTACAAGTACATTCCTGAAGGAAACAAAGTGTCTTCTTCTTCTCCCGCTCGAGCAGTTGTTCAACAGTTGAAGCGCATTGTAGTGGTTGCAATACGCTATCACAACCATGGGATAGGCTCCGACAAGTTCTGCCAAGACTGA 543 0.4696 MAMPGEPFVRIVIINVDPSKDIMESILDAVHLGRAYLTILNTFGTVTMVILHNSLHVVATLTLHEPFTLLCLNGSYLLNNNFNLNFRAIIPPPLSFGIHLSTSRGQAIGGAIGSQVIVDGNVKITLWTFWHPKIYKYIPEGNKVSSSSPARAVVQQLKRIVVVAIRYHNHGIGSDKFCQD 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00381 180 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 5 146 - -
Gma20g00381 180 Pfam Plants and Prokaryotes Conserved (PCC) domain 10 129 IPR005175 -
Gma20g00381 180 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 146 IPR014476 GO:0003680
Gma20g00381 180 ProSiteProfiles PPC domain profile profile. 5 150 IPR005175 -
Gma20g00381 180 SUPERFAMILY AF0104/ALDC/Ptd012-like 9 135 - -
Gma20g00381 180 Gene3D - 8 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00381 Gma-Chr20 6935317 6937362 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00381 13 147 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 26.667 7.13e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00381 - - gmx:113000708 271.166