Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00378 ATGTTTGAAACCTTCCTCAAAATGCCCCTCGATTATTATCTCTTCAACTCTTTAGTGAAGAAGCCGTGTGGTAGGCCACCAGGCTCCAAGAACAAACACAAGATCATTTCCCTCCCTGTGGCCCAACCTAGTGAGTCATTTTTGAGGATTGTCATCATCAATGTAGACTCGGGTAAGGACATCATAGAGTCCATTGCTGACGTTGCTGGCCTAGGTCACGCCAACCTCGCTGTCCTTAGCCCTTCTGGCACAATCACCAGGGTGACCCTTCATAACTCACTCCATGGCGCTACTGCCCTAACACTCAATGGACCAACCCTTCGCCTTGCTTTCCCTCAACAGCTCATACTTATTCAACGGCCACAGCTTCCCCCTCCTTTATCCTTCGGGATCCACCTCACCACCTCTCGAGGCCTAGCCATTGGTGGTGCCATTGGCGGCCAAGTCAATGCTAGTGATGAAATTAAGATCACGCTCTGCACCTTTTGGAATCCTGAAATTTATAAGTACATTCCTGAAGGAAGCAATGGTGACAATGATGACAACAACATTAGCAAAAAGAATTATAAGAATAACCCTATTGATTGCAATGGGGTGGAAACCAATTGGTGTTCAGCATTTAGTTGTGGAATCCATGGGTGGCAAATAATGTGA 654 0.4664 MFETFLKMPLDYYLFNSLVKKPCGRPPGSKNKHKIISLPVAQPSESFLRIVIINVDSGKDIIESIADVAGLGHANLAVLSPSGTITRVTLHNSLHGATALTLNGPTLRLAFPQQLILIQRPQLPPPLSFGIHLTTSRGLAIGGAIGGQVNASDEIKITLCTFWNPEIYKYIPEGSNGDNDDNNISKKNYKNNPIDCNGVETNWCSAFSCGIHGWQIM 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00378 217 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 193 - -
Gma20g00378 217 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 15 193 IPR014476 GO:0003680
Gma20g00378 217 Pfam Plants and Prokaryotes Conserved (PCC) domain 49 163 IPR005175 -
Gma20g00378 217 SUPERFAMILY AF0104/ALDC/Ptd012-like 47 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00378 Gma-Chr20 6863768 6865101 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00378 18 217 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 26.291 3.66e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00378 - - gmx:102670527 231.491