Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00375 ATGCCACGAGGCAGGCCATCAGGCTCCAAGAATAAGCCCAAGACCACTTCCCTCCTAGTGGCCCAACCCGTTGAGCCCTCCATGAAGCTTGTCATCATCAACGTTGACCGAGGTAAGGACATCATGCAAACTATTCTTAATGTCGCTCACCAGGGTTGCGTCAGCCTCACTGTCCTCAGCGCCTCTGGCACAGTCACTAGTGTGACTCTTTGCAACTCACCCAACGATGGCGGTGGTGCCCTCATGCTCCATGGGCCTTTCACCTTACTCTCCATCAATGGCTCATACTTCTACAACAACAACCAATACAATCTTCACTCTGGAGCAACCCGTTCCCCTCCTGTATCCTTCGGGATCCACCTCTCCACCTCTAAGGGCAAGATCCTTGGCGGTGCAATTGGCGGCAATGTCATCGCCGGTGACGATGTCAGCATCACACTCTCCACCTTCAGCCACCCTGAGATTTACATGTACGTTCCTAAGGATGAGGAAGAAGACAATGATGAAAAAAAACAATAA 519 0.5145 MPRGRPSGSKNKPKTTSLLVAQPVEPSMKLVIINVDRGKDIMQTILNVAHQGCVSLTVLSASGTVTSVTLCNSPNDGGGALMLHGPFTLLSINGSYFYNNNQYNLHSGATRSPPVSFGIHLSTSKGKILGGAIGGNVIAGDDVSITLSTFSHPEIYMYVPKDEEEDNDEKKQ 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00375 172 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 2 168 - -
Gma20g00375 172 SUPERFAMILY AF0104/ALDC/Ptd012-like 27 153 - -
Gma20g00375 172 CDD DUF296 32 140 IPR005175 -
Gma20g00375 172 Pfam Plants and Prokaryotes Conserved (PCC) domain 31 151 IPR005175 -
Gma20g00375 172 Gene3D - 27 166 - -
Gma20g00375 172 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 168 IPR014476 GO:0003680
Gma20g00375 172 ProSiteProfiles PPC domain profile profile. 25 172 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00375 Gma-Chr20 6609435 6609953 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00375 2 167 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.911 6.34e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00375 - - gmx:102669197 323.553