Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00372 ATGACCAACAATTCCATGGCAATCTCCAACTCCCAAAACTCTGTTTCCTTCGACTTAGACTTGACATCCTCCTGGCTCAACCAAACTAGCTCCTGCTCCCAGCGCCCTCATTGTCCACCATCACCAGCTACAAACCAACCCCTAGAGAATCTCCCTCTTACAAACCTACCCACCAAGAAGCCACGTGGTAGGCCCGCAGGCTCCAAGAACAAGCCCAAGACCACCCCCTTCCTGGTGGCCCAACCTGTGGAACCCTACATGAAGGTCATCATTGTCAATGTGACCCCAAGCAGCGATATCATTGAGTCCATTCTTGATGTTGCTCATCAAGGCCACGTTAGCCTCACTGTCCTCGGTGCCTCTGGAACGATCACCGGAGTAACCCTCAACAACTTTTCGCATGGTGTTGATGCCCTCACACTTCGCGGGCCCTTCACCTTGCTCTCCCTCAATGGCTCCTACTTATACAACAACCACTATGCCCTTCACCCTGGAGCCACCCCTGCCCCTCCCTTATCCTTTGGTATCAGCTTTTCCACCTCTCAAGGGCAAGTCTTTGGCGGTGCCATTGGCGGTAGAGTCATTGCCGGTAATGATGTCAGCCTTACAATTTGCACCTTCAAGAATCCTGTGATGCATAAGTACGCTTCTAGAGACAAAGAAAGGGACATGGGTGACAATAATAACAACAACAATTATAACAATAACTAA 711 0.5021 MTNNSMAISNSQNSVSFDLDLTSSWLNQTSSCSQRPHCPPSPATNQPLENLPLTNLPTKKPRGRPAGSKNKPKTTPFLVAQPVEPYMKVIIVNVTPSSDIIESILDVAHQGHVSLTVLGASGTITGVTLNNFSHGVDALTLRGPFTLLSLNGSYLYNNHYALHPGATPAPPLSFGISFSTSQGQVFGGAIGGRVIAGNDVSLTICTFKNPVMHKYASRDKERDMGDNNNNNNYNNN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00372 236 ProSiteProfiles PPC domain profile profile. 84 230 IPR005175 -
Gma20g00372 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 234 IPR014476 GO:0003680
Gma20g00372 236 MobiDBLite consensus disorder prediction 29 75 - -
Gma20g00372 236 Gene3D - 86 229 - -
Gma20g00372 236 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 208 IPR005175 -
Gma20g00372 236 CDD DUF296 88 207 IPR005175 -
Gma20g00372 236 MobiDBLite consensus disorder prediction 217 236 - -
Gma20g00372 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 33 234 - -
Gma20g00372 236 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00372 Gma-Chr20 6538253 6538963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00372 59 222 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 32.143 5.42e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00372 - - gmx:102659818 444.891