Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00371 ATGACCAACAATTCCATGGCAATCTCCAACTCCCAAAACTCTGTTTCCTTCGACTTAGACTTGACATCCTCCTGGCTCAACCAAACTAGCTCCTGCTCCCAGCGCCCTCGTTGTCCACCATCACCAGCTACAAACCAACCCCTAGAGAATCTCCCTCTTACAAACCCACCCACCAAGAAGCCACGTGGCAGGCCCGCAGGCTCCAAGAACAAGCCCAAGACCACCCCTTTCCTGGTGGCCCAACCTATGGAACCCTACATGAAGGTCATCATTGTCCATGTGACCCCAAGCAGCGATATCATTGAGTCCATTCTTGATGTTGCTCAGCGAGGCCACGTTAGCCTCACTGTCCTTAGTGCCTCTGGAACGATCACCGGAGTAACCCTCAACAACTTTTCGCATGGTGTTGATGCCCTCACACTTCGCGGGCCCTTCACCTTGCTCTCCCTCAATGGCTCATACTTATACAACAACCACTACACCCTTCACCCTGGAGCCACCCCTGCCCCTCCCTTATCCTTTGGGATAAGCTTTTCCACCTCTCAAGGGCAAGTCTTTGGCGGTGCCATTGGCGGTAGAGTCATTGCCGGTAATGATGTCAGCCTTACAATTTGCACCTTCAAGAACCCTGTGATGCATAAGTACGCTTCTAAAGACAAAGAAAGGGACATGGGTGACAATAATAACAACAACAATTATAACAATAACTAA 711 0.5035 MTNNSMAISNSQNSVSFDLDLTSSWLNQTSSCSQRPRCPPSPATNQPLENLPLTNPPTKKPRGRPAGSKNKPKTTPFLVAQPMEPYMKVIIVHVTPSSDIIESILDVAQRGHVSLTVLSASGTITGVTLNNFSHGVDALTLRGPFTLLSLNGSYLYNNHYTLHPGATPAPPLSFGISFSTSQGQVFGGAIGGRVIAGNDVSLTICTFKNPVMHKYASKDKERDMGDNNNNNNYNNN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00371 236 Gene3D - 86 229 - -
Gma20g00371 236 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 208 IPR005175 -
Gma20g00371 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 233 IPR014476 GO:0003680
Gma20g00371 236 MobiDBLite consensus disorder prediction 28 76 - -
Gma20g00371 236 CDD DUF296 88 207 IPR005175 -
Gma20g00371 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 33 233 - -
Gma20g00371 236 ProSiteProfiles PPC domain profile profile. 84 230 IPR005175 -
Gma20g00371 236 MobiDBLite consensus disorder prediction 217 236 - -
Gma20g00371 236 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00371 Gma-Chr20 6487022 6487732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00371 58 222 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.136 2.14e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00371 - - gmx:102663326 441.425