Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00369 ATGACCAACAATTCCATGGCAATCTCAACCTCTCAGAACTCCGTCTCCTTCGACTTAGACTTGACATCCTCTTGGCTCAACCACACTAGCTCCTCCTCCCAGTGCCCTCGTTGTCCACCATCACCAGCTACAAACCAACCACTAGAGAATCTCCCTCTTACAAACCCACCCACCAAGAAGCCACATGGCAGGCCCGCAGGCTCCAAGAACAAGCCCAAGATCACCCCCTTCCAGGTGGCCCAACCTGTGGAACCCTGCATGAAGGTCATCATTGTCAATGTGACCCGGAGCAGCGATATCATTGAGTCCATTCTTGATGTTGCTCATCAAGGCCATGTTAGCCTCACTGTCCTCAGTGCCTCTGGAACGATCACCGGAGTAACCCTCAACAACTCTTCGCATGGTGTTGATGCCCTCACACTTCGCGGGCCCTTCACCTTGCTCTCCCTCAATGGCTCATACTTATACAACAACCACTACGCCCTTCACCCTGGAGCCACCCCTGCCCCTCCCTTATCATTTGGGATCAGCTTTTCCACCTCTCAAGGGCAAGTCTTTGGTGGTGCCATTGGTGGTAGAGTCATTGCCGATAATGATGTCAGCCTTACAATTTGCACCTTCAAGAACCCTGTGATGTACAAGCATGCTTCTAGAGACAAAGAAAGGGACAGGGGTGACAATGATAACAACAACAATTATAACAATAACTATAGCTTTTAA 720 0.5014 MTNNSMAISTSQNSVSFDLDLTSSWLNHTSSSSQCPRCPPSPATNQPLENLPLTNPPTKKPHGRPAGSKNKPKITPFQVAQPVEPCMKVIIVNVTRSSDIIESILDVAHQGHVSLTVLSASGTITGVTLNNSSHGVDALTLRGPFTLLSLNGSYLYNNHYALHPGATPAPPLSFGISFSTSQGQVFGGAIGGRVIADNDVSLTICTFKNPVMYKHASRDKERDRGDNDNNNNYNNNYSF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00369 239 MobiDBLite consensus disorder prediction 216 239 - -
Gma20g00369 239 MobiDBLite consensus disorder prediction 30 77 - -
Gma20g00369 239 Gene3D - 86 228 - -
Gma20g00369 239 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 233 IPR014476 GO:0003680
Gma20g00369 239 ProSiteProfiles PPC domain profile profile. 84 230 IPR005175 -
Gma20g00369 239 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 216 - -
Gma20g00369 239 CDD DUF296 88 196 IPR005175 -
Gma20g00369 239 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 28 233 - -
Gma20g00369 239 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 208 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00369 Gma-Chr20 6379859 6380578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00369 59 222 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.548 1.60e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00369 - - gmx:102663194 432.565