Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00368 ATGACCAACAATTCCATGGCAATCTCAACCTCTCAGAACTCCGTCTCCTTCGACTTAGACTTGACATCCTCTTGGCTCAACCACACTAGCTCCTCCTCCCAGTGCCCTCGTTGTCCACCATCACCAGCTACAAACCAACCACTAGAGAATCTCCCTCTTACAAACCCACCCACCAAGAAGCCACATGGCAGGCCCGCAGGCTCCAAGAACAAGCCCAAGATCACCCCCTTCCTGGTGGCCCAACCTGTGGAACCCTGCATGAAGGTCATCATTGTCAATGTGACCCCGAGCAGCGATATCATTGAGTCCATTCTTGATGTTGCTCATCGAGGCCATGTTAGCCTCACTGTCCTTAGTGCCTCTGGAACGATCACCGGAGTAACCCTCAACAACTCTTCGCATGGTGTTGATGCCCTCACACTTCGCGGGCCCTTCACCTTGCTCTCCCTCAATGGCTCATACTTATACAACAACCACTACGCCCTTCACCCTGGAGCCACCCCTGCCCCTCCCTTATCATTTGGGATCAGCTTTTCCACCTCTCAAGGGCAAGTCTTTGGCGGTGCCATTGGTGGTAGAGTCATTGCCGATAATGATGTCAGCCTTACAATTTGCACCTTCAAGAACCCTGTGATGTACAGGTATGCTTCTAGAGACAAAGAAAGGGACAGGGGTGACAATGATAACAACAACAATTATAACAATAACTATAGCTTTTAA 720 0.5028 MTNNSMAISTSQNSVSFDLDLTSSWLNHTSSSSQCPRCPPSPATNQPLENLPLTNPPTKKPHGRPAGSKNKPKITPFLVAQPVEPCMKVIIVNVTPSSDIIESILDVAHRGHVSLTVLSASGTITGVTLNNSSHGVDALTLRGPFTLLSLNGSYLYNNHYALHPGATPAPPLSFGISFSTSQGQVFGGAIGGRVIADNDVSLTICTFKNPVMYRYASRDKERDRGDNDNNNNYNNNYSF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00368 239 ProSiteProfiles PPC domain profile profile. 84 230 IPR005175 -
Gma20g00368 239 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 208 IPR005175 -
Gma20g00368 239 Gene3D - 86 227 - -
Gma20g00368 239 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 28 233 - -
Gma20g00368 239 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 233 IPR014476 GO:0003680
Gma20g00368 239 MobiDBLite consensus disorder prediction 218 239 - -
Gma20g00368 239 CDD DUF296 88 196 IPR005175 -
Gma20g00368 239 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00368 Gma-Chr20 6351333 6352052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00368 59 222 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 32.738 4.36e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00368 - - gmx:102663194 422.165