Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00366 ATGACCAACAATTCCATGGCAATTTCCAACTCCCAGAACTCCGTCTCCTTCGACTTAGACTTGACATCCTCCTGGCTCAACCACACTAGCTCCTCCTCTCGACTCCCTCGTTGTCCACTATCACCAACTACAAACCAACCCCTAGAGAATCTCCCCCTTACAAACCCATCCACCAAGAAGCCATGTGGTAGGCCCGTGGGCTCCAAGAACAAGCCCAAGACCACCCTTTTCTTGGTGGCCCAACCTGTGGAACCCTACATGAAGGTCATCATTGTCAATGTGACCCCAAGCAGCGATATCATTGAGTCCATTCTTGATGTTGCTCGTCGAGGCCACGTTAGCCTCACTGTCCTCAGTGCCTCTGGAACAATCACTGGAGTAACCCTCAACAACTCTTTGCATGGTGTTGATGCCCTCACACTTCACGGGCCCTTCACCTTGCTCTCCCTCAATGGCTCCTACTTATACAACAACCACTACACCCTTCACCCTGGAGCCACCCCTGCCCCTCCCTTATCCTTTGGGATCAGCTTTTCCACCTCTCAAGGGCAAGTCTTTGGCGGTGCCATAGGCAGTAGAGTCATTGCCGGTAATGATGTTAGCCTTACAATTTGCACCTTCAAGAACCCTGTGATGTACAAGTACGCTTCTAGAGACAAAGAAAGAGACAGGGGTGacaataataacaataacaattataacaataacTAA 711 0.4866 MTNNSMAISNSQNSVSFDLDLTSSWLNHTSSSSRLPRCPLSPTTNQPLENLPLTNPSTKKPCGRPVGSKNKPKTTLFLVAQPVEPYMKVIIVNVTPSSDIIESILDVARRGHVSLTVLSASGTITGVTLNNSLHGVDALTLHGPFTLLSLNGSYLYNNHYTLHPGATPAPPLSFGISFSTSQGQVFGGAIGSRVIAGNDVSLTICTFKNPVMYKYASRDKERDRGDNNNNNNYNNN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00366 236 MobiDBLite consensus disorder prediction 29 68 - -
Gma20g00366 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 31 232 - -
Gma20g00366 236 Gene3D - 86 224 - -
Gma20g00366 236 CDD DUF296 88 207 IPR005175 -
Gma20g00366 236 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 208 IPR005175 -
Gma20g00366 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 31 232 IPR014476 GO:0003680
Gma20g00366 236 ProSiteProfiles PPC domain profile profile. 84 230 IPR005175 -
Gma20g00366 236 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 215 - -
Gma20g00366 236 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00366 Gma-Chr20 6242400 6243110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00366 59 222 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 32.143 9.64e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00366 - - gmx:100777794 444.506