Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00364 ATGTCCACCCCCTCCAACATTTGCCATCACCAGTCGGTCTTTCATGGCCCCAATTTCAAAATAGTGAGCAGGCCAAACGGCTCTAAGAACAAGCCCAAGCCCACCTCCCTCTCAGTTGGCCAACCCATTGAACTGTCTGTGAAACTTGTCACGATCAACATTGTTTTGGGTAGGGATGTCATGGAGAAAATCCTTGACGTTGCTCGTCGTGACCATGTTAGCCTCACCATTCTCAATGCCTCTGGCATGATAAAAAACGTAATTGTTTGCAACCTACCACAAGGTGCCCCTACCTTGCTCATTGGGCCCTTGACCTTGCTCTCCCTCATTACCTTCTACTTATACAACAACCAATACACCCTTCACCTAGGAGCCACCCCTCCCCCTCCATTTTCTTTCAGTATCAAGCTTTGCACATCTCATGGACAAGTCTTCGATGGACTTATTGGTGGTAGCATAATTGTTGGTGACAATGTCAGCCTCATGGTCTCCACCTTAAAAAAAAACCCAATATTTCAAATTTATTTCTAA 531 0.4576 MSTPSNICHHQSVFHGPNFKIVSRPNGSKNKPKPTSLSVGQPIELSVKLVTINIVLGRDVMEKILDVARRDHVSLTILNASGMIKNVIVCNLPQGAPTLLIGPLTLLSLITFYLYNNQYTLHLGATPPPPFSFSIKLCTSHGQVFDGLIGGSIIVGDNVSLMVSTLKKNPIFQIYF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00364 176 ProSiteProfiles PPC domain profile profile. 44 176 IPR005175 -
Gma20g00364 176 Pfam Plants and Prokaryotes Conserved (PCC) domain 51 166 IPR005175 -
Gma20g00364 176 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 169 - -
Gma20g00364 176 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 169 IPR014476 GO:0003680
Gma20g00364 176 SUPERFAMILY AF0104/ALDC/Ptd012-like 50 166 - -
Gma20g00364 176 Gene3D - 48 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00364 Gma-Chr20 6208932 6209462 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00364 24 173 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 27.044 1.09e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00364 - - gmx:102662240 323.553