Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00358 ATGGCCCCAATTTCCAAGAAGTTATGTGGCAGGCCAAATGGCTCTAAGAACAAGCCCAAGTCCACCTCCCGCTCGATTTGCCAACCCATTGAATCCTCTGTGAAACTTGTCACGATCAACGTTGTTTCAGGCAAGGGTGTCATGGAGACCATCCTTGATGTTGCTTGTTGTGACCATGTTAGCCTCACTGTTCTCAATGCCTTTGGCATGATCAAGAATGTGATCATTTGCAACCCACCACAAGGAGCCACCCATCCCCCTCCATTTTCTTTCGCGTTCAAGCTTTGCACATCTCATGGACAGGTCTTCGATGGACTTATTGGTGGTAGCATCATTGTTGGTGACAATGTCAGCCTCATGGTCTCCACCTTCAAAAAACCCAATATTTACAAATTTATTTCTGAAGGCAAAGAAGGGAACAATGATGACAACAACGTATAA 441 0.4535 MAPISKKLCGRPNGSKNKPKSTSRSICQPIESSVKLVTINVVSGKGVMETILDVACCDHVSLTVLNAFGMIKNVIICNPPQGATHPPPFSFAFKLCTSHGQVFDGLIGGSIIVGDNVSLMVSTFKKPNIYKFISEGKEGNNDDNNV 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00358 146 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 79 IPR014476 GO:0003680
Gma20g00358 146 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 84 138 IPR014476 GO:0003680
Gma20g00358 146 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 79 - -
Gma20g00358 146 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 84 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00358 Gma-Chr20 6080815 6081323 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00358 4 138 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 23.353 4.49e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00358 - - gmx:102661745 276.174