Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00344 ATGGAGAGCCAAAGCCAACTTGAAGTTTCAAATTCTGAGCAGGGAACCACCTTCATCAAAACTTGTTTCAATGGTATCAACACTTTGACAGGTATTGGAATACTCTCAATACCATATGCAGTTTCTCAAGGAGGGTGGTTGAGTTTCATTCTGCTAATTGTTTTTGCAATGATGTTTTGGTACACGGGGTTACTTCTACAGAGGTGTATGAACAAGCATCCACTAATCAAATCTTACCCTGACATAGGTGAGGTTGCATTTGGGCTAAGAGGAAGAGCTATGATCTCTACATTCATATACATAGAATTGTTTTTAGTGGCCGTTGAGCTTCTGATATTGGAAGGCGACAATCTAGAAAAATTGTTTCCTCATATGAACTTCAAAATTGGTAGCCTTAGAATTGAAGGTAAAAGTGGTTTTGTGGTGCTAGCTGCTTTGGTCATACTACCAACAACATGGTTGAGAAGTTTGGGAGCTTTGGCTTATGTTTCTCTTGGTGGGGTAATGGTTTCTATTGTTTTGATTGGTTGTGTTGTGTGGGTGGGTGAAATTGATGGTGTTGGGTTTCATGAAAGTGGCCAATTAGTAAATTGGGAGGGATTGACTACTGCTGTGAGCCTTTTTGCATTCTGTTACTGTGCACATGGAGTGATGCCCACATTGATCAACTCTATGAACGATAGAAGCCAGTTTGGCAAGGTTTTGATTGTTTGCTTTGTAGCAAGCACTATTATCTATGGAACCATTGCTGTTTTAGGCTACGCAATGTTTGGAGATTATTTGATGTCTCAAATAACCTTAAATCTACCATCAAAGAAAATAAGTACTAAATTAGCTATTTATAGCACAATAATCAATCCTTTCACTAAGTATGCTGTACTAATCACCCCAATAGCTAATGCTATTGAGGAAAAATGGCTTCTCTGCAAAAGAAAGCCTATTGCCATTTTGGTTAGAACAACCATTTTGGTCAGCACCGTGCTTATGGCACTATTCATGCCGTTTTTCGGTTATGTTATGGCATTTATTGGTGCATTTTTTAGCGTGACAATCTCATTGTTGTTCCCTTGCATCTGTTACTTGAAGATGAACAAAGCTGCTCGGCAATTTGGGTTGGAGTTGATCGTCATAATTGTAATTCTCTTCGTAGGTATATTCATTGGAATATTGGGTACCTATCTTTCTGTGAGACACATAGTGAATCATATGAAGTTGTGTTCTTAA 1224 0.3848 MESQSQLEVSNSEQGTTFIKTCFNGINTLTGIGILSIPYAVSQGGWLSFILLIVFAMMFWYTGLLLQRCMNKHPLIKSYPDIGEVAFGLRGRAMISTFIYIELFLVAVELLILEGDNLEKLFPHMNFKIGSLRIEGKSGFVVLAALVILPTTWLRSLGALAYVSLGGVMVSIVLIGCVVWVGEIDGVGFHESGQLVNWEGLTTAVSLFAFCYCAHGVMPTLINSMNDRSQFGKVLIVCFVASTIIYGTIAVLGYAMFGDYLMSQITLNLPSKKISTKLAIYSTIINPFTKYAVLITPIANAIEEKWLLCKRKPIAILVRTTILVSTVLMALFMPFFGYVMAFIGAFFSVTISLLFPCICYLKMNKAARQFGLELIVIIVILFVGIFIGILGTYLSVRHIVNHMKLCS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00344 407 PANTHER OS06G0228500 PROTEIN 12 401 - -
Gma20g00344 407 PANTHER OS05G0424000 PROTEIN-RELATED 12 401 - -
Gma20g00344 407 Pfam Transmembrane amino acid transporter protein 15 393 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00344 Gma-Chr20 5338889 5342334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00344 1 400 Amino Acid or Auxin Permease AAAP Family AT3G28960 46.898 1.71e-137 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00344 K15015 - gmx:100812006 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00344 20 5338889 5342334 Gma20g00344 20 5338889 5342334 ECH