Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00337 ATGGATCTGCAAAATGTGCAAAACCAAAGCATGATGCGTTTGGTTCTGTCCACTGATGCCAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCAACGGTTCACTGAGGCTATTAATCAGCTTGGAGGTGCAGAAAAGGCAACTCCTAAGAGTCTGATGAGAGTGATGGGGATTCCAGGACTCACTTTGTACCACCTCAAGAGCCATTTACAGAAATATAGGCTTGGGAAAAGCCAACCACTAGAAACCTGTTCTGACAACAAGCAAGAAGGTTACAGTGAAATCCAGAACAGTGATGGTCATTGCAGCAAGGAAATCAGCATTGGGACCCAGAATCAGATGACTGAAAGCTTGAAGATTGCTGAGGCTCTCCAAATGCAAATGGAAGTACAAAGAAAACTCTATGAACAAATTGAGGTACAAAAACATTTGCAGCTTAGGATTGAAGCTCAAGGGAAGTACTTACAATCAGTGCTAACAAAGGCACATGAAGCACTTGCAAGACACAGTTCTTCCACAACTGGTGTAGAACTTGCAAAATTTGAACTTTCTCTGTTAGTGTCAATAATCAATAATGCATGTCCAAGCTCTCCAATTTCAGAACTCACAGAAACACGAGGGTTAAGTTTGAACTGTGGAGAGAGGAAACAAGACAGAGGAACCATGTGTTCACTTGAAAGCTCTTTGACATCATCTGAAAGCTCTGAACAACAACACATCATGGATGAGGCAGAAAACCCTCAAAAGTTTGATGGTGTTTCAGTTGAATTGCCGTTGATTTCCATTCATCCAGCAGAAGTTAAAGCATTCAAGGGAGATACAAGTGTTGATGGGAGAAAGAGAAGTGCAGAAACTGATTCTGATCATTGTGTTGATCAACCTTGTGGCAACAAGAAGTTGAGGAAATCTGAAGTGTCACAAATGCTTGACTTGAACAGCCAATACCAGAGAGACATTGACTCAAGTGTGAAAGAAATAGATTTAAATTTCAGTTCAAGCTTTTAG 1005 0.4139 MDLQNVQNQSMMRLVLSTDAKPRLKWTPELHQRFTEAINQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQPLETCSDNKQEGYSEIQNSDGHCSKEISIGTQNQMTESLKIAEALQMQMEVQRKLYEQIEVQKHLQLRIEAQGKYLQSVLTKAHEALARHSSSTTGVELAKFELSLLVSIINNACPSSPISELTETRGLSLNCGERKQDRGTMCSLESSLTSSESSEQQHIMDEAENPQKFDGVSVELPLISIHPAEVKAFKGDTSVDGRKRSAETDSDHCVDQPCGNKKLRKSEVSQMLDLNSQYQRDIDSSVKEIDLNFSSSF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00337 334 Pfam MYB-CC type transfactor, LHEQLE motif 119 164 IPR025756 -
Gma20g00337 334 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 21 76 IPR006447 GO:0003677
Gma20g00337 334 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 334 IPR044848 GO:0003700
Gma20g00337 334 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 334 - -
Gma20g00337 334 Pfam Myb-like DNA-binding domain 23 74 IPR001005 -
Gma20g00337 334 Gene3D - 20 78 - -
Gma20g00337 334 SUPERFAMILY Homeodomain-like 20 76 IPR009057 -
Gma20g00337 334 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00337 Gma-Chr20 5044978 5046546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00337 12 331 G2-like Transcription Factor Family AT1G69580 48.060 2.28e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma20g00337 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00337 - - gmx:100805252 649.047