Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00324 ATGGGGCATGTATTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACTTACAAGCATGAAATTAACTCTAATAGATATGTTGGTGAGAGGCCAAAAGAAGAGGAAAAAAAAAGATATCCAACCTGGTGTGATCGTATATTGTGGCTAGGCAAAGGAATAAAACAACTACAATATGGACATGCAGAAATTAAGTTCTTGGATCATAGACCACACTACCATATTAAATACTGGGTGTTAAAATCATGGAGCACTCTTCTCAAGTTAGCTAAGAGCGAAGAATCCATTGTGAGCGTGGAGGGCATGACAAGTGAAAAGCTGGCTGGACCAAATCTGAACTCTTTATGTGGATTTGAGGTCATAGATAAGATAAAGTATTTGGTTAAAGAAGAATGTCCTATTACTGTTTCATGTGTTGACATCCTTGCCATGGCTGCACGTGATGTTGTTGAATTGAGAGGAGGACCAAGATGGGATGCCTTGCTTGGAAGGAAGGATGCTCTCGAGTCAAGTTTTAGTGGAGCTAACATATTAATTCCTGCTCCAAATTCATCTTTGGAGGTTCTCATAGATAATTTTAAGCAACAAGGCCTCGACATAGAAGACTTGGTAACTCTATCTGGTAGCCATACTATAGGAAGAGCAAGATGTCTAAGCTTCAGGCAGAGGATATATAATGCAAAAGAGGAATATCATTATGGCTATGATCACTACAAACGATACACAAGTTTCAGGAGAATCCTGCGGTCCATATGCCCTGTTGAGGGAAGGGACACTAAATTTGCACCCTTGGATTTTCAAACCCCAAAAAGATTTCACAATCACTACTTCATAAACATTCTTGAAGGGAAAGGCTTGTTAGGTTCTGACAATGTTCTTATCAGCCATGACTTAGATGGAAAGACTACAGAGCAGGTGTGGGCTTATGCCTCTAATGAAAAACTTTTGATTAAGATGGGAAACATCAATGTTCTTACAGGAAATGAGGGGGAAATTAGGAGGAATTGTAGGTTTGTTGATGCTTAG 1029 0.3975 MGHVFDGWKEGLINFPPTYKHEINSNRYVGERPKEEEKKRYPTWCDRILWLGKGIKQLQYGHAEIKFLDHRPHYHIKYWVLKSWSTLLKLAKSEESIVSVEGMTSEKLAGPNLNSLCGFEVIDKIKYLVKEECPITVSCVDILAMAARDVVELRGGPRWDALLGRKDALESSFSGANILIPAPNSSLEVLIDNFKQQGLDIEDLVTLSGSHTIGRARCLSFRQRIYNAKEEYHYGYDHYKRYTSFRRILRSICPVEGRDTKFAPLDFQTPKRFHNHYFINILEGKGLLGSDNVLISHDLDGKTTEQVWAYASNEKLLIKMGNINVLTGNEGEIRRNCRFVDA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00324 342 Pfam Peroxidase 99 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 PANTHER PEROXIDASE 72-RELATED 99 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 PRINTS Plant peroxidase signature 280 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 PRINTS Plant peroxidase signature 264 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 Gene3D Endonuclease/exonuclease/phosphatase 1 97 IPR036691 -
Gma20g00324 342 SUPERFAMILY Heme-dependent peroxidases 102 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 SUPERFAMILY DNase I-like 3 74 IPR036691 -
Gma20g00324 342 Gene3D - 101 340 - -
Gma20g00324 342 ProSiteProfiles Plant heme peroxidase family profile. 71 341 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g00324 342 PANTHER PEROXIDASE 20 99 341 - -
Gma20g00324 342 Gene3D Peroxidase, domain 2 181 321 - -
Gma20g00324 342 CDD secretory_peroxidase 97 340 IPR033905 GO:0004601|GO:0042744
Gma20g00324 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 203 213 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00324 Gma-Chr20 4709411 4711975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00324 103 341 Peroxidase AT2G35380 61.538 1.33e-108 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00324 K00430 - gmx:106797731 489.189