Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00319 ATGATTTACACGAAAGAGATGAAGGAGAGGTTAAGTGGACAGGACAACCGCTATGCATTTATGAACCTTATTTTGAAGGATTCTGGTCTTTTCCACATCAAAAATCTCTTTATCGAGGAATTGGCCTGGATTGAACGTTTACACAAAAATGCTTGGATTGGATTTCAGTCTTGGAGAGCAACAACAAGGAAGGTGCAAAAGGGATCGAGAAGCATGTTGTGCAACTATGTTCTAGCAGAAGACTGTGACCAACCTGACTATGTTAAATTGGCTAAGGCCCTTTGTGTAGAGCACAATGTTAGCCTACTGACAATTCTGGGTGCAAAGACCCTTGGAAAATGGGCTGGTTTGTGCAAGATTGATTCGGAAGGAAAAGCTAGGAAGGTTACTGGTTGCTTCTGCAGTTGTGCAGCATTGACAGCAAGCTTGCATCAGTTGAGGCTCGGGTTCTTCTTGCTCCATGGTTGA 468 0.4338 MIYTKEMKERLSGQDNRYAFMNLILKDSGLFHIKNLFIEELAWIERLHKNAWIGFQSWRATTRKVQKGSRSMLCNYVLAEDCDQPDYVKLAKALCVEHNVSLLTILGAKTLGKWAGLCKIDSEGKARKVTGCFCSCAALTASLHQLRLGFFLLHG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00319 155 Gene3D - 47 147 IPR029064 -
Gma20g00319 155 PANTHER 40S RIBOSOMAL PROTEIN S12 29 153 - -
Gma20g00319 155 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 62 136 IPR004038 -
Gma20g00319 155 SUPERFAMILY L30e-like 76 135 IPR029064 -
Gma20g00319 155 PANTHER 40S RIBOSOMAL PROTEIN S12 29 153 IPR000530 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00319 Gma-Chr20 4598278 4599575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00319 77 134 Cytoplasmic Ribosomal Protein Gene Family AT1G15930 77.586 4.89e-28 99.8