Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00314 ATGGTTGTCACTGCATTGTGGGTTGAACACAATGATGATATTGGCATGCCTATTGATGTTGCTTTGGGATCTTTGGTCAAATCTCAAAACCCTGCCACTTTCCCTGACAGATCTGGCCCTTTTGGAAATGATCCCTCTAAATTACAAAATAAAGATGTCAGAGCACACATTGGGATTCCTTCCTCACCTTCCATGCAAAACAAACCCATTGTCGCAATAAGGCCAACGACAAGTGGATCATCAGGAGAACAACCAGATGATGAGGAAGTGGAGGGAGAGATTAATAAGACTAAAAACATGACACCTGTTGATGCAAAACGAGTAAGGAGGATGCTTTCTAATAGGGAGTCAGACAGATGCTCAAGAAGGAGAAAGCAGACTCATTTAACTGAGCTGGGGACACAGGTCTCCCAATTACGAAGTGAAAATTCTTCGTTGTTAAAGCGATTCATTGATGTGAGCCCGAAATACAATAATGTTGCAATTGATAATAGAGTACTGAAAGTTGATGTTGAAACATTAAGAGTAAAGGATTCTGTCAAAACTGCAAGCACAGAGATTTCTAGTGAAGTAATCATTGAGACATTTCATAATGATGATGAAGCATTGGCCGCTTCGAACGACAAGGTTGTGGACAAAACTATCTAA 648 0.4043 MVVTALWVEHNDDIGMPIDVALGSLVKSQNPATFPDRSGPFGNDPSKLQNKDVRAHIGIPSSPSMQNKPIVAIRPTTSGSSGEQPDDEEVEGEINKTKNMTPVDAKRVRRMLSNRESDRCSRRRKQTHLTELGTQVSQLRSENSSLLKRFIDVSPKYNNVAIDNRVLKVDVETLRVKDSVKTASTEISSEVIIETFHNDDEALAASNDKVVDKTI 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00314 215 Gene3D - 105 157 - -
Gma20g00314 215 PANTHER BZIP TRANSCRIPTION FACTOR 41 181 - -
Gma20g00314 215 MobiDBLite consensus disorder prediction 91 105 - -
Gma20g00314 215 MobiDBLite consensus disorder prediction 58 105 - -
Gma20g00314 215 CDD bZIP_plant_GBF1 107 158 IPR045314 GO:0003700|GO:0006355
Gma20g00314 215 Pfam bZIP transcription factor 105 149 IPR004827 GO:0003700|GO:0006355
Gma20g00314 215 SUPERFAMILY Leucine zipper domain 106 150 IPR046347 GO:0003700|GO:0006355
Gma20g00314 215 SMART brlzneu 102 166 IPR004827 GO:0003700|GO:0006355
Gma20g00314 215 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 104 149 IPR004827 GO:0003700|GO:0006355
Gma20g00314 215 MobiDBLite consensus disorder prediction 60 83 - -
Gma20g00314 215 PANTHER BASIC LEUCINE ZIPPER 63 41 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00314 Gma-Chr20 4398010 4403835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00314 62 177 bZIP Transcription Factor Family AT5G24800 52.500 3.31e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma20g00314 bZIP_1 2e-11 CL0018