Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00268 ATGGTGTTTCATCATTTTCAAGATGTTGCATATACTGGGTTCATGTTTATCCTTGGCAATCTAAGAGTTGAAATGATCCGAGTACCTGATTGGGCATTTGAAGCTGCAGGTCAAGAAACAAGGAGTATGGCCCAAGATGCTGCATATCATCTTGGACTTTACCTAACTCCAGCCCAGCTTCTGCCGAAAACGTCCGCACTTGTTCAGCTGCCGGcggtggtttctggtgactgcatcggtggtttctgTTTCTCCCTCTGCATTATTCTGAAAAAGGTGCCGATCACAAGCAAGTTATATAGTGTGGATAGTCAAGAAATGGAAAGTAGTATAGTTGATGCTTTGGCTACTTCAAGAAAATGTAGAAGAGATGAAGAGGAGGAAGAAGAACTTGAACAAGTATTTTTCATTATTGTTAGTGTTGTCACTATGCTTTTGGGTGCACTGACTTGGTATCATGACAAGTATTTTGTTAAGGAACCTACCCAAAATTTGGAATTAGAAAGGCATAGTTTCCTCAATCGTCTATACAGGGGAACAGAAACTGATTGCATTGAACAATTAAGGGTCAGTAAAAAGACATTTTTTAAGCTTTGTAGAATTTTACAAGAGAAAGGGCAATTGGTAAAAACAAAAAATGTTCCTATAGATGAAGTTGTGGCAATGTTTTTGCATATCCTTGCTCACAACCTAAAGTATAGAGTTGTGCACTTTAGTTATTGTAGATCCATGGAAACAATTAGTAGGCAATTCAAGAATGTCCTGCGAGCTATAATGAAAGTAAGCAAAGAATATTTGAAGTTTCATGAGTATAATCTAGAGGGCTCGGTGGAAAACAAATGGAGATGGTTTAAGaattcgattggagcacttgatgggatgcatattccagtaacagtttctgcagaagatagacctagatatcgtaataaaaaagggttagcaggagattctcgagtattgcgagatgctttgcgtcgtcaaaattgtctccatataccaaatggtaaatattttcttgtggatgtgggAATGCTAATTTTACATGTCTCACCTTTCGCATGGAACTTGGAAATGGAACGTGTGCTAGCTGAAGTGCTTAGAGATCAAAGAAATTTGGGCAATAAAGGTGATGGAAATTGGAAAGCAGTAGCATATAGTACTGCAGCTCAAATTTTGTCCAAGCGTTTTGGAGTTCACCTCATGGCAGATAATGTTAAGAATCGTTTTAAGCTTTGGAGAACATGGTATGGAATTATGAGTGACATTCTTAGTCAAAGTGGATTTGACTGGGATAGCACAAAGTACATGATTATCGTTGAAAATGAAATTGCATGGAATGAATATGTTAAGTCACATGAAGAGGTCAAACGATTTCGATTCAAAGTCATTCCTAATTGGGATGATATTGTTGACCTATGTGCAAAGGATAGAGCTACTGGACTCGGAGCAGAAAATGCATTAGATGCAGATGATATCATGAGCAAAGAAACAAATGAAGAGGAAGTAATTCATAGTGTGAGTTTTGACTTAGAGGGATCAAGTTCTGCCACGAGAAAAAACATTCGCCAACTCTTCCATTGGATGAGAAAGAGGATTACATCTTATCTTTTATGCCTTAATGTCAAATTACAGAAAATATGTGAAGGAATTCCTGTGTTGAAGCAAATGCAATTAGAAAATTCAAAATTATTTTgccagacaactacctcaaaggaattattaacagtgctttga 1737 0.3166 MVFHHFQDVAYTGFMFILGNLRVEMIRVPDWAFEAAGQETRSMAQDAAYHLGLYLTPAQLLPKTSALVQLPAVVSGDCIGGFCFSLCIILKKVPITSKLYSVDSQEMESSIVDALATSRKCRRDEEEEEELEQVFFIIVSVVTMLLGALTWYHDKYFVKEPTQNLELERHSFLNRLYRGTETDCIEQLRVSKKTFFKLCRILQEKGQLVKTKNVPIDEVVAMFLHILAHNLKYRVVHFSYCRSMETISRQFKNVLRAIMKVSKEYLKFHEYNLEGSVENKWRWFKNSIGALDGMHIPVTVSAEDRPRYRNKKGLAGDSRVLRDALRRQNCLHIPNGKYFLVDVGMLILHVSPFAWNLEMERVLAEVLRDQRNLGNKGDGNWKAVAYSTAAQILSKRFGVHLMADNVKNRFKLWRTWYGIMSDILSQSGFDWDSTKYMIIVENEIAWNEYVKSHEEVKRFRFKVIPNWDDIVDLCAKDRATGLGAENALDADDIMSKETNEEEVIHSVSFDLEGSSSATRKNIRQLFHWMRKRITSYLLCLNVKLQKICEGIPVLKQMQLENSKLFCQTTTSKELLTVL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00268 578 Pfam Myb/SANT-like DNA-binding domain 355 449 IPR024752 -
Gma20g00268 578 PANTHER NUCLEASE HARBI1 ISOFORM X1-RELATED 144 526 - -
Gma20g00268 578 PANTHER UNCHARACTERIZED 144 526 IPR045249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00268 Gma-Chr20 3405543 3421473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00268 20 78 C3H Transcription Factor Family AT3G47990 56.250 4.03e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00268 - - gmx:102667665 459.529