Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00265 ATGGTTGACGGCGGAAAAGGAGAGGGAGGAGGAGAGCAAGCATCGCCACCCTCGACGGCGGCGCGTCACGGAACCACTCTCCGGCCACGCGCCTCCGTGGAGAGTGTTTTCAGCGGCGGGTATAGCCCCGGTCCCATGGCTCTGCTTTCCAATTTCTACGGCGACGGCGATGAGTGCAAGTCGTTCTCGGAGCTCCTCGCCGGCGCCATGGTGGACCCCACGGCACCCTCGCCCATGCCCACCACAACGTTCGCGCTTCCACCTGGATTCATCGATTCACCTTCTCAAGGCCAATTTGGAATAACACACCAGCAGATGCTAGCACAGATCTCATCTCAAGCTGTGCAAACCCACTCTGAACATCCATTCTCTATATCAGCCGTATCTGCTACCTCATCATGTGCTGCACAACAGCTGATTCCACCCTCAATGCCAGATTCTAAGGTGAAAGAATCCCTTGATTATTCTCACTCTGAACAAAAATTGCAGTCTTCTGTGAATGTTGATAATAAGCCTAATAATGATGGTTACAACTGGAGGAAGTATGGGCAAAAACATGTGAAAGGTAGTGACTTCTCAAGAAGTTATTATAAGTGCACACGTCCAAATTGTCCTGTGAAGAAAAAACTTGAGCGTTCTCTTGAGGGTCATGTGACTGCAATTATTTATAAAGGAGAACACAATCATCAACGTCCTCATCGCAGTAAGATTGTGAAAGAAACACAAACTTCAAATGAAAATTCAGTGTCTAAGATGGATCTAGGGTCTAGTCAGGCCACAGGTGAACATGGATCAGGAACAAGTGATAGTGAGGAAGTAGATGACCATGAAACTGAAGCAGATGAGAAAAATGATGAACCTGATGCCAAGAGAAGAAACACAGAAGCCAGGATCCAGGATCCAGCCACTTTGCATAGATCTGTTGCAGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTGAATCTCTTAGATGATGGATATCGATGGCGCAAATATGGGCAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTATTACAAATGCACGACCCAAGGTTGCAAAGTTCGGAAGCATGTTGAGAGGGCTTCAATGGATCCTAAAGCTGTCATAACAACATACGAAGGAAAACACAATCATGATGTGCCTGCAGCTAAGACTAATAGCCACACACTTGCCAACAATAGTGCATCCCAGCTAAAAGCACAAAAGTTTGCCATACCCGACGTGAAACATAGTTCCAGCAGCAGGGGTGTTACTGGCAATGAGCAGCGACCTGTGGCAAGTCTAAGATTGAAGGAAGAGCAGATCACATAG 1320 0.4712 MVDGGKGEGGGEQASPPSTAARHGTTLRPRASVESVFSGGYSPGPMALLSNFYGDGDECKSFSELLAGAMVDPTAPSPMPTTTFALPPGFIDSPSQGQFGITHQQMLAQISSQAVQTHSEHPFSISAVSATSSCAAQQLIPPSMPDSKVKESLDYSHSEQKLQSSVNVDNKPNNDGYNWRKYGQKHVKGSDFSRSYYKCTRPNCPVKKKLERSLEGHVTAIIYKGEHNHQRPHRSKIVKETQTSNENSVSKMDLGSSQATGEHGSGTSDSEEVDDHETEADEKNDEPDAKRRNTEARIQDPATLHRSVAEPRIIVQTTSEVNLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTQGCKVRKHVERASMDPKAVITTYEGKHNHDVPAAKTNSHTLANNSASQLKAQKFAIPDVKHSSSSRGVTGNEQRPVASLRLKEEQIT 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00265 439 MobiDBLite consensus disorder prediction 409 439 - -
Gma20g00265 439 SMART WRKY_cls 173 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma20g00265 439 SMART WRKY_cls 324 383 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma20g00265 439 MobiDBLite consensus disorder prediction 223 240 - -
Gma20g00265 439 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 19 438 - -
Gma20g00265 439 ProSiteProfiles WRKY domain profile. 319 384 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma20g00265 439 MobiDBLite consensus disorder prediction 139 177 - -
Gma20g00265 439 MobiDBLite consensus disorder prediction 410 424 - -
Gma20g00265 439 MobiDBLite consensus disorder prediction 241 266 - -
Gma20g00265 439 ProSiteProfiles WRKY domain profile. 168 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma20g00265 439 Pfam WRKY DNA -binding domain 325 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma20g00265 439 Pfam WRKY DNA -binding domain 174 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma20g00265 439 MobiDBLite consensus disorder prediction 223 303 - -
Gma20g00265 439 MobiDBLite consensus disorder prediction 1 36 - -
Gma20g00265 439 MobiDBLite consensus disorder prediction 158 174 - -
Gma20g00265 439 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 438 IPR044810 GO:0003700
Gma20g00265 439 SUPERFAMILY WRKY DNA-binding domain 169 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma20g00265 439 MobiDBLite consensus disorder prediction 283 299 - -
Gma20g00265 439 Gene3D WRKY domain 309 385 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma20g00265 439 Gene3D WRKY domain 158 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma20g00265 439 SUPERFAMILY WRKY DNA-binding domain 316 384 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00265 Gma-Chr20 3301342 3306003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00265 20 439 WRKY Transcription Factor Family AT2G03340 47.876 4.97e-138 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma20g00265 WRKY 2.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00265 - - gmx:100784936 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00265 20 3301342 3306003 Gma20g00265 20 3301342 3306003 ECH
Gma07g02198 07 44346467 44350497 Gma20g00265 20 3301342 3306003 GST