Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00258 ATGGGAACCAAAGTTCAGAGTCTGCCAGGATATTACTCAATGAGAGATCTTAATGAGGAATCCAGTAGTTGCGGTTGGCCCCTATATTATGGAGATAAAACACTGGCAAATGGGCAGTACTATCATAATTATCTGTCGAGTGGTGCTGCAGATGCATGTTCAACACATGATAAGGATAATGTGAAGCAGACGATGCTTGAGCATGAGGCCATATTTAAGAATCAGGTCTTTGAACTTCACCGCTTATACAGAATACAAAGGGATTTGATGGATGAAGTTAAAATGAAAGATTTATACAGAAACCATATATCTGTTGAGAAATCATTTTCCACAGGTCCCTTGGCATCTCAGTTAACATCTGAAGATGGTAAAAAATGGCATGTTCCTGGATTTCCAATAGTTGGAAGTTCTACTTGTGCTAGACCATCTATTTCAGGCGTTGAGGGCATTCATTCTCCTTTGAGTTCTAATAAAGGAATCAGTAAGCAAGCTGGTCTGTTCCCATCGCCAAATGGGAGTAGTAGCTCGAAAGATGTTGAGATACTGGGTTTCAGACCCTCAAAGGTGAGGAGAAAAATGTTTGACCTTCACCTCCCTGCTGATGAGTACATTGATACTGAAGAAAATGAAAAGCCTGGTGACGAAAAGATTAGTGGCACCACAAATTTTCTTTCTGATAGGAGCTATAAACACGAAAAGGGAGGTGATATGGACCTTTTTAGTGGCAATGGTGGCAAGACTGGTGGCCAGGAAGACATTTCAAGACCTAAGCAATCTTTAAGAAGCAGAAATAGTTTGGCAGACTTAAATGAACCTGTTCATGTGGAAGAAACACATGATGTTGCTTACGTTCCTCCTCAGAACCATAATTCCTATCAAGGGGCAACTGAATGTTCTGATCTATCTGCCAAACAGAAGTTGAGATTCTTTGGTCTGTCCAAGGAAGATTTACTGAACTCACATCATGGAACTGACAGTTGGGCTCGTAATAATGGATATTTGGATAATGACAGGAATGGAAAAATGTGGATTTCTTCAATAGAGTCAGGGCAAGCTAAAAGCAATCCAAAAACCATTCCTCAACTCCTCAAACAAGACCAATCACTTTTATCTTCCCAAACAATGCAAGATGAACTCAGTAAATCTCATGAGCCTACATCTGATTATCTAACTAATGGAAGCAAGACTGATTTGTTGAGGGAAAAGACAGCTAGTGGTTTAGATATCAGTGAAAGAAATCATGAATCCTCTGCTAATAAGCTTTCAGAGTCTGTTGCATCATCACATAGGCATGGTCTCTTTGCAATTGCTCCTTCCTCAGATTTAGCTAGATCTTGGTCTCACTCATCTTGGGACATGGCAAGTAGTACCCTAAACCAGAAGTTTATATCTGTACAGACACCTCCATCTCCATGTCTAAATGCATCTGGTTCCTTGAGTAGGAGTTCCCAGTCACATCAGAGTAATGGGATGTTGGGAGATAGTTGGCCTCTAAATATCAATTCAAAGCTTAATCCCGGTTTTCGATGTGAGGCATCTGGGAAAAATGGATTTTACCCTGGGACTTTATCTGGGTCCAAGGAGCTGTCAGTGAACATCTCTTCAATTAGCTATCTTAACCATGATAGTGATTGCAAGAAATTTCCTGAACACTTCAATAATGGTCCAGCAAACTGCTACAAGAGTTCAAATTTGAATTCAAATTGCTATGACATGAAGTCTGCAAAAAATATTAACTTGAATGAGATACTTTCAAATGCTTCATCCAACAACTTAGTTTCCCAGTCAGGTCTGGGAATCATGGATGGAGAACAGAAGCATGAGGAGCAGCTTGCAGTGTTGCCTTGGCTTAGAGCCAAGACAACATGTAAGAATGTGGCACAAAATGCTGGAGGTTTAAATGTTTTCCAAGTTTCTTCTTCATCTAACAAAGAAGAAACTGGAAAGGGGTCTAATGGAAAATTTATTCACAATGTAACTACAGGTTTGTTTTCAAATGATATTGAGCTAAAGAGGAGAGAAGTAAGCGAGAGTTCTAGTAAAAGGAAAATTCTTGGTGTTCCCATATTTGACATACCTCATATTTCTGCTAAGGAGTTATCTTCATTCATGTCTCCATCTGTGTCGGTTCCTAATCCATCTGACGTAGAATTAGTGGGAAATTATCGGAAAGAACAGATACTTGATATTAACTTGCCTTGTGATGCTGCTGTTCCTGAGTTGGACGTACAAGCTGTAGCTACAGTTATTGTTTGTGAGACAGGATTATCCACAACAAAAGCCAACTCTAGAAATCAGATTGATCTGAACTTGAGTATGAATGAGGATGAAGCATTTGTGACAAATATTCCAGCAACCAACTTAGAAACAAAGGCAGAAATAGATCTTGAAGCCCCTGCTGTTTCTGAGACAGAGGAGGATGCCATTCCCGAAGAAAAGAAGCTTGAAACTCCTCTAGTTTCGCTACTTGGCCCACAAGACACAGTTGAAAAGCCACAGGATGAACTTATGAGGTATGCAGCAGAGGCAATTGTTGTCTTGTCATCTTCTTGCTGCCAGCAAGTTGATGATGTGATCAGCAGTCCATCAGAAGGCCCGGTGGTGGACCCTCTAAGTTGGTTTGTGGATATAGTTTCCTCGTGTGTGGATGATCTACAGAAGAAGACTGATAATTCAAGGGAAAAAAATATCGAGGATAATGAAGAATCTTCCTCAGATGGAATGGATTACTTTGAATCAATGACATTGAAACTGACAGAGACCAAGGAAGAAGACTACATGCCCCAGCCCCTTGTTCCAGAAAACTTCAAAGTGGAAGAAATTGGAACAACCTCGTTACCTACTCGGACACGAAGGGGGCCGGCTAGGCGAGGGAGGCAGCGAAGGGACTTCCAAAGGGATATCCTTCCAGGCCTTGCATCTTTATCGAGGCATGAAGTAACAGAAGATCTCCAAACATTTGGAGGACTCATGAAAGCAACAGGTCATGCATGGAATTCAGGATTAAACAGGAGAAGCTCTTCTAGGAATGGGTGTGGTAGGGGTAGGCGGCGATCACAGGCACAGGTTACCCCAACTCCTCCCCCTCCTCCTGTGGCAACTGTTGAAACAAGCACCCCACTTATTCAGCAGCTTAGTAACATTGAAGTGGTGGGATTGGAGGATAGAAGCCTAGCAGGTTGGGGCAAGACAACCAGAAGGCCCCGTAGGCAAAGGTTCCCGGCAGGTAATCCTCCGTCAATCCGGTTAATCTGA 3255 0.4187 MGTKVQSLPGYYSMRDLNEESSSCGWPLYYGDKTLANGQYYHNYLSSGAADACSTHDKDNVKQTMLEHEAIFKNQVFELHRLYRIQRDLMDEVKMKDLYRNHISVEKSFSTGPLASQLTSEDGKKWHVPGFPIVGSSTCARPSISGVEGIHSPLSSNKGISKQAGLFPSPNGSSSSKDVEILGFRPSKVRRKMFDLHLPADEYIDTEENEKPGDEKISGTTNFLSDRSYKHEKGGDMDLFSGNGGKTGGQEDISRPKQSLRSRNSLADLNEPVHVEETHDVAYVPPQNHNSYQGATECSDLSAKQKLRFFGLSKEDLLNSHHGTDSWARNNGYLDNDRNGKMWISSIESGQAKSNPKTIPQLLKQDQSLLSSQTMQDELSKSHEPTSDYLTNGSKTDLLREKTASGLDISERNHESSANKLSESVASSHRHGLFAIAPSSDLARSWSHSSWDMASSTLNQKFISVQTPPSPCLNASGSLSRSSQSHQSNGMLGDSWPLNINSKLNPGFRCEASGKNGFYPGTLSGSKELSVNISSISYLNHDSDCKKFPEHFNNGPANCYKSSNLNSNCYDMKSAKNINLNEILSNASSNNLVSQSGLGIMDGEQKHEEQLAVLPWLRAKTTCKNVAQNAGGLNVFQVSSSSNKEETGKGSNGKFIHNVTTGLFSNDIELKRREVSESSSKRKILGVPIFDIPHISAKELSSFMSPSVSVPNPSDVELVGNYRKEQILDINLPCDAAVPELDVQAVATVIVCETGLSTTKANSRNQIDLNLSMNEDEAFVTNIPATNLETKAEIDLEAPAVSETEEDAIPEEKKLETPLVSLLGPQDTVEKPQDELMRYAAEAIVVLSSSCCQQVDDVISSPSEGPVVDPLSWFVDIVSSCVDDLQKKTDNSREKNIEDNEESSSDGMDYFESMTLKLTETKEEDYMPQPLVPENFKVEEIGTTSLPTRTRRGPARRGRQRRDFQRDILPGLASLSRHEVTEDLQTFGGLMKATGHAWNSGLNRRSSSRNGCGRGRRRSQAQVTPTPPPPPVATVETSTPLIQQLSNIEVVGLEDRSLAGWGKTTRRPRRQRFPAGNPPSIRLI 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00258 1084 Pfam Plant protein of unknown function (DUF863) 139 1074 IPR008581 -
Gma20g00258 1084 MobiDBLite consensus disorder prediction 370 397 - -
Gma20g00258 1084 MobiDBLite consensus disorder prediction 886 907 - -
Gma20g00258 1084 PANTHER - 1 1083 - -
Gma20g00258 1084 MobiDBLite consensus disorder prediction 886 902 - -
Gma20g00258 1084 MobiDBLite consensus disorder prediction 946 965 - -
Gma20g00258 1084 MobiDBLite consensus disorder prediction 203 263 - -
Gma20g00258 1084 MobiDBLite consensus disorder prediction 995 1035 - -
Gma20g00258 1084 PANTHER DUF863 FAMILY PROTEIN 1 1083 - -
Gma20g00258 1084 MobiDBLite consensus disorder prediction 999 1022 - -
Gma20g00258 1084 MobiDBLite consensus disorder prediction 1061 1084 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00258 Gma-Chr20 3203605 3207816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00258 - - gmx:102666610 2086.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00258 20 3203605 3207816 Gma06g01783 06 18456359 18462378 ECH
Gma20g00258 20 3203605 3207816 Gma04g01600 04 43491602 43495142 ECH
Gma20g00258 20 3203605 3207816 Gma20g00258 20 3203605 3207816 ECH
Gma02g01036 02 11252529 11258704 Gma20g00258 20 3203605 3207816 ECH
Gma01g00505 01 7213359 7217408 Gma20g00258 20 3203605 3207816 ECH