Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00243 ATGGGTTTTTCTTTTTGGTTTACAACAAAGGAGCATGTTGTGGGGTGGTATAGCACTGGTCCAAAGTTGCGTGAAAATGACTTTGACACTCATGGGTTATTTAATGTCTATGTTCCAAATCCTGTCTTGGTTATAATTGATGTTGAACCTAAGGAATTAGGAATCCCAAGAAAAACATATTATGTCGTTGAAGAGGTTAAAGAGTATTCCAAGAAACTGACATATAGTTTATTCTGTGTACATAATGCCACTCAAAAAAGTCAAAAGGTATTTATACATGTGCCATCAGAGATTGCTACTAATGAAGTTGAGGAAATATTAGTGGAACACTTGCTTAGATATGTGAAGGATACAACCATTAGCATCCTTGTGACAAAGGTAAGTGCAAACCTCACAACCTTGAAGGGTTTGGATGCAAGACTTAAAGAGATCAGGGGTTTCTTTGACCTTGTTATTGATGGAAAGCTTCCATTAAACCATGAGATCCTGTACCATCTGCAAGACGTGTTTAACCTGTTACCAAATCTCAATGTTGTTGATCTTTTATCAAGGCTTTGGTATAGGGCTCCAGAACTTCTTTTGGGTTCAACTGATTATGGATTCAACATTGATCTCTGTAGTGCAGGATGCCTATTGGCTGAGATGCTTGTTGGAAGACCAATTATGCCTGGCAGGACAGGGGTACCAATTAGCTAA 696 0.3836 MGFSFWFTTKEHVVGWYSTGPKLRENDFDTHGLFNVYVPNPVLVIIDVEPKELGIPRKTYYVVEEVKEYSKKLTYSLFCVHNATQKSQKVFIHVPSEIATNEVEEILVEHLLRYVKDTTISILVTKVSANLTTLKGLDARLKEIRGFFDLVIDGKLPLNHEILYHLQDVFNLLPNLNVVDLLSRLWYRAPELLLGSTDYGFNIDLCSAGCLLAEMLVGRPIMPGRTGVPIS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00243 231 Pfam Maintenance of mitochondrial structure and function 102 178 IPR024969 -
Gma20g00243 231 Gene3D Transferase(Phosphotransferase) domain 1 182 226 - -
Gma20g00243 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 8 185 - -
Gma20g00243 231 SUPERFAMILY Protein kinase-like (PK-like) 183 226 IPR011009 -
Gma20g00243 231 Gene3D Cytidine Deaminase, domain 2 7 122 - -
Gma20g00243 231 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7 8 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00243 Gma-Chr20 2956955 2959072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00243 177 226 Core Cell Cycle Gene Families AT5G64960 56.000 5.22e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Gma20g00243 MitMem_reg 1.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00243 K03038 - gmx:100816479 400.208