Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00227 ATGAAGCTGCTGCGTCTTCGAATCCTCCTCATTGCTCTGCTTCTCATGTTGTGCGCCCCATTTTCATCTTCTTCCAAACCCAAAGACCCCTTCCTCGGCGTCGCCCCCGAAGATGACGACTATTACAAGTCTTCCGATGTAATAAGTTGTAAAGATGGATCCGGAAAATTCACCAAGGCTCAGTTCAATGATGATTTCTGCGATTGTGCTGATGGCACCGATGAACCTGGTACATCGGCATGTCCTGGTGGAAAATTCTATTGTCGGAATGCAGGACATTCTCCTGTTTACTTGTTTTCATCTAGAGTGAACGACGGAATTTGTGATTGCTGTGATGGAACCGATGAATACGATGGTCAAGTAAAGTGTCCAAATACCTGCTGGGAGGCTGGTAAAGTTGCTAGAGACAGACTGAAAAAAAAGATTGCCACTTATCAAGAGGGTGTCAAATTGCGAAAGCAAGAAATTGAACAAGCTAAAGTAGCTATGGAGAAGGATGAGGCCGAACTTTCAAAATTAAAAAAGGAAGAAAGTATACTTAAAGGGATCGTGAAACAGCTAAAGGATCATAAAGAACAAATAGATAAGGCAGAGGAGGAGGAGCGTTTACAGAAAGAAAAAGAAGAGAAGCAGAAAAGGGAGTCTGAGGAGAAGGCTAATGAAGCAAAAGATAAAGCTGATGAAGATACAGAGCATAGAAATGAAGCTGAAAAGCATTCAGATATTGAAGACAATACTCTAGAAAATAACCATGATAAAATAGAAAATCTAGAGGGTTCTCCTGCGGATCAGGATGAAGCAGGGGACAaattagcagatgtacttgatgatgatgatgatgatgatgatgatgaagccagtgatagtcatgggagtgaaggATCTTTGCATAATAAAGTGGAAGAGAATGCAAAAGAAGCTGAGGAAGAACCTATTGTTAAATCTGAAACTGATATAAAGGTCAGAAACAAAGAGTCTTCTGATGAAATCATCAATAAGGGGAATGATGCATCTGAAAATACTGAGGGATTATCAAGGGAAGAATTGGGCCGGCTTGTTGCTTCACGTTGGACAGGAGAAAATACTGATAAGCCAAGTGCTGTACCTGATACAACATTAGACAATGAAGATCGGGAAGATCCAAAGGGGAGAAATAATGAGGAATATGAAGGCTATGCTTCtgaaactgatgatgacaacaacaaatatgatgatgacagccacaaatacgacgatgaagatgaagttgatgatgaatatcgagaggatgagcatgatgacCTTTCTTCCTCCTACAAATCTGATTCTGATAATGAACCAGACTTGTCAGATAATCCTTCTTGGTTAGAGAAAATACAGAGAACTGTACGCAATATTTTTCAGGTTGTTAATTTATTCCAGGCTCCAGTGAACCAGACAGATGCTGCTCGTGTACGCAAGGAATATGATGAATCAAGTGCCAAGTTGTCGAAAATACAGTCTAGAATATCAAGTCTGAAGCAAAAGCTAAAACATGATTTTGGTCCAGCAAAGGAGTTTTATTCATTCTATGATCATTGCTTTGAGGGCAAGGAGAACAAGTACACTTACAAAGTCTGCCCCTATAAGCAGGCTTCTCAGGAGGAGGGTTATTCCAATACCCGTTTGGGGAGCTGGGACAAATTTGAGGATTCGTACAGAGTAATGGTGTTTTCTAATGGTGATAAATGCTGGAATGGTCCAGATAGGAGTTTGAAGGTCAAGTTAAGATGCGGGTTGAAAAACGAGATTACTGATGTAGATGAACCAAGCCGTTGCGAATATGTAGCTGTATTATCTACCCCGACCCTTTGCCAAGAGGAAAGGCTGAAGGAGTTACAACTCAAACTAGACCTTTTGAATTCGGAAATACCAGCAAACCATGACGAGTTGTGA 1914 0.373 MKLLRLRILLIALLLMLCAPFSSSSKPKDPFLGVAPEDDDYYKSSDVISCKDGSGKFTKAQFNDDFCDCADGTDEPGTSACPGGKFYCRNAGHSPVYLFSSRVNDGICDCCDGTDEYDGQVKCPNTCWEAGKVARDRLKKKIATYQEGVKLRKQEIEQAKVAMEKDEAELSKLKKEESILKGIVKQLKDHKEQIDKAEEEERLQKEKEEKQKRESEEKANEAKDKADEDTEHRNEAEKHSDIEDNTLENNHDKIENLEGSPADQDEAGDKLADVLDDDDDDDDDEASDSHGSEGSLHNKVEENAKEAEEEPIVKSETDIKVRNKESSDEIINKGNDASENTEGLSREELGRLVASRWTGENTDKPSAVPDTTLDNEDREDPKGRNNEEYEGYASETDDDNNKYDDDSHKYDDEDEVDDEYREDEHDDLSSSYKSDSDNEPDLSDNPSWLEKIQRTVRNIFQVVNLFQAPVNQTDAARVRKEYDESSAKLSKIQSRISSLKQKLKHDFGPAKEFYSFYDHCFEGKENKYTYKVCPYKQASQEEGYSNTRLGSWDKFEDSYRVMVFSNGDKCWNGPDRSLKVKLRCGLKNEITDVDEPSRCEYVAVLSTPTLCQEERLKELQLKLDLLNSEIPANHDEL 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00227 637 MobiDBLite consensus disorder prediction 289 332 - -
Gma20g00227 637 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 7 637 IPR039794 -
Gma20g00227 637 Coils Coil 475 502 - -
Gma20g00227 637 Pfam Glucosidase II beta subunit-like 26 175 IPR028146 -
Gma20g00227 637 Gene3D - 513 611 IPR009011 -
Gma20g00227 637 Coils Coil 609 629 - -
Gma20g00227 637 MobiDBLite consensus disorder prediction 370 409 - -
Gma20g00227 637 PANTHER BNACNNG14010D PROTEIN 7 637 - -
Gma20g00227 637 MobiDBLite consensus disorder prediction 410 424 - -
Gma20g00227 637 MobiDBLite consensus disorder prediction 188 269 - -
Gma20g00227 637 MobiDBLite consensus disorder prediction 188 446 - -
Gma20g00227 637 Coils Coil 149 239 - -
Gma20g00227 637 MobiDBLite consensus disorder prediction 270 288 - -
Gma20g00227 637 ProSiteProfiles MRH domain profile. 518 613 IPR044865 -
Gma20g00227 637 Pfam Glucosidase II beta subunit-like protein 479 633 IPR036607 -
Gma20g00227 637 MobiDBLite consensus disorder prediction 425 440 - -
Gma20g00227 637 SUPERFAMILY Mannose 6-phosphate receptor domain 518 611 IPR009011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00227 Gma-Chr20 2751032 2759396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00227 22 637 Calmodulin-binding Proteins AT5G56360 58.136 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00227 K08288 - gmx:100811132 1131.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02174 07 44026049 44037301 Gma20g00227 20 2751032 2759396 GST