Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00225 ATGGCAGAAGCAGAATCCGAAGCACTGCGCCTCAAGGCCATGGCGGAGTCCAAGTTCAAAGGCTCCAACAATAACGCCAAATCCGCTCTGAAGTACGCCAAGCGCGCCCACCGCCTCTGCCCGCACCTCACTGGTGTGTCGGAGACCGTCGCTGCCCTCTCCGTCCTCGCTGCGCCAGACTGGTACCGCGCCCTCGGCGTAGAGCCCTTCGCCAGCAGCAGCGTCATCCGGAGGCAGTACAAGAAGCTCGCCCTACTCCTCCACCCCGACAAGAACCCCCACGTGGCCTCTGAGGAGGCCTTCAAGCTCCTCGACGAAGCCTTAGACTGA 330 0.6273 MAEAESEALRLKAMAESKFKGSNNNAKSALKYAKRAHRLCPHLTGVSETVAALSVLAAPDWYRALGVEPFASSSVIRRQYKKLALLLHPDKNPHVASEEAFKLLDEALD 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00225 109 Pfam DnaJ domain 60 108 IPR001623 -
Gma20g00225 109 PRINTS DnaJ domain signature 62 80 IPR001623 -
Gma20g00225 109 PRINTS DnaJ domain signature 80 95 IPR001623 -
Gma20g00225 109 PRINTS DnaJ domain signature 96 109 IPR001623 -
Gma20g00225 109 SUPERFAMILY Chaperone J-domain 58 108 IPR036869 -
Gma20g00225 109 SMART dnaj_3 59 108 IPR001623 -
Gma20g00225 109 Gene3D DnaJ domain 44 109 IPR036869 -
Gma20g00225 109 CDD DnaJ 60 107 IPR001623 -
Gma20g00225 109 ProSiteProfiles dnaJ domain profile. 60 109 IPR001623 -
Gma20g00225 109 PANTHER BNAC03G44070D PROTEIN 5 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00225 Gma-Chr20 2728960 2729289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00225 6 109 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.051 2.69e-12 59.7