Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00205 ATGGATGCAAATCGCGAGCAAATTGTGGACGTTGGGTCGGTGGTGGAAGCCGTTTCTGCTGACGACGGTGACGCTCCTCTCTACAGCCTCGAAAGTCTCTGCATGCGTTGCGGTGAAAACGGGACTTCAAGATTTTTATTGACTTTAATTCCTAACTTTAGAAAGATTTTGTTGTCAGCTTTTGAATGTCCACACTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGTGAAATTCAACCACGTGGTTGTTGTTACTCTTTGGAGATCCCATCATGCGAACAAAAGATGCTAAATCGACAAGTGGTAAAAGCTGAATCTGCTACCATTAAGATACCAGAACTGGATTTTGAGATTCCACCAGAAGCTCAACGTGGTAGTCTGTCAACGGTGGAAGGGATACTTATGAGAGCAGCTGATGAACTTCAGGCTCTTCAAGAGGAACGCAAAAAAGTTGCTCCAGAGACAGCTGAGGCAATTGATCAGTTCCTGGTGAAACTGCGAGCCTGTGCAAAAGGAGAATCAGCCTTCACATTTATTCTTGATGATCCTGCTGGAAACAGCTTCATTGAAAACCCGTTTGCACCATCATCTGATCCATCATTGACTATCAAGTTTTATGAGAGAACTCCTGAGCAGCAATCATCATTGGGATACCTTGTTGGTTCCACTCACATTGAAGGAACTCATGATCAAGCACCAGAAAGGGGAGAAGTGACTGCTGATCAAGTGAGGAGAGAACCTCATGGGTCAATAGGGGCAACAGCTGGTCATCGAGCCATTGCACAGAGTAACAGTTCAGAAATTGCTGAAGCCTTATTTCGATATACTGCACCAGAAGAGGTGATGACATTCCCAACTTCTTGTGGTGCTTGTGCCGCTAGGTGTGAGACTCGAATGTTTGTCACCAATATTCCTTACTTCCAAGAAGTAATTGTTATGGCATCCACATGTGATTCCTGTGGTTACCGCAACTCTGAGGTATATGCTGATTTCTTGAGTGTAGTTCTCTATTTTGAGGGCTGGAATAAAATATTTCTCTTCACCTTGCAGTTGAAACCTGGTGGTCGAATTCCTGAAAAAGGGAAAAAAATTACTCTTAATGTGAAAAATGTTAATGACCTGAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCTGAACTTGACTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATTGTTACAACTGTTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTTGAGAGGGTCCATGGCTTTACTTTTGGAGATAGTCTCGATGAACAGAGAAAAAACAAGTGGATAGATTTTAAAGCAAGGCTAAACAAGCTTCTTAGCTTGGAAGAAGCTTGGACTCTAATTCTCGATGATGCATTAGCCAATTCTTTTGTAGCTCCTGCAACTGATGATCTGAAAGAGGACAATCAATTATCATTTGAGGAATACGAGAGGTCATGGGAACAAAATGAAGAATTAGGTCTGAATGATATAGACACCTCTTCTGCCGATGCTGCTTATGAATCAACAAATACTACTAAAACTTAG 1560 0.4218 MDANREQIVDVGSVVEAVSADDGDAPLYSLESLCMRCGENGTSRFLLTLIPNFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYSLEIPSCEQKMLNRQVVKAESATIKIPELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERKKVAPETAEAIDQFLVKLRACAKGESAFTFILDDPAGNSFIENPFAPSSDPSLTIKFYERTPEQQSSLGYLVGSTHIEGTHDQAPERGEVTADQVRREPHGSIGATAGHRAIAQSNSSEIAEALFRYTAPEEVMTFPTSCGACAARCETRMFVTNIPYFQEVIVMASTCDSCGYRNSEVYADFLSVVLYFEGWNKIFLFTLQLKPGGRIPEKGKKITLNVKNVNDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLITKISESLERVHGFTFGDSLDEQRKNKWIDFKARLNKLLSLEEAWTLILDDALANSFVAPATDDLKEDNQLSFEEYERSWEQNEELGLNDIDTSSADAAYESTNTTKT 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00205 519 Gene3D ZPR1, A/B domain 357 499 IPR042451 -
Gma20g00205 519 Gene3D ZPR1, A/B domain 78 219 IPR042451 -
Gma20g00205 519 PANTHER ZINC FINGER PROTEIN ZPR1 1 328 IPR040141 -
Gma20g00205 519 SMART zpr1 32 192 IPR004457 GO:0008270
Gma20g00205 519 SMART zpr1 287 471 IPR004457 GO:0008270
Gma20g00205 519 PANTHER ZINC FINGER PROTEIN ZPR1 351 517 IPR040141 -
Gma20g00205 519 Gene3D ZPR1, zinc finger domain 24 77 IPR042452 -
Gma20g00205 519 Pfam ZPR1 zinc-finger domain 32 191 IPR004457 GO:0008270
Gma20g00205 519 Pfam ZPR1 zinc-finger domain 352 469 IPR004457 GO:0008270
Gma20g00205 519 Pfam ZPR1 zinc-finger domain 288 328 IPR004457 GO:0008270
Gma20g00205 519 Gene3D ZPR1, zinc finger domain 281 330 IPR042452 -
Gma20g00205 519 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 354 503 IPR004457 GO:0008270
Gma20g00205 519 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 34 217 IPR004457 GO:0008270
Gma20g00205 519 Coils Coil 128 148 - -
Gma20g00205 519 MobiDBLite consensus disorder prediction 497 519 - -
Gma20g00205 519 PANTHER ZPR1 ZINC-FINGER DOMAIN PROTEIN 351 517 - -
Gma20g00205 519 PANTHER ZPR1 ZINC-FINGER DOMAIN PROTEIN 1 328 - -
Gma20g00205 519 MobiDBLite consensus disorder prediction 493 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00205 Gma-Chr20 2294995 2320446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00205 1 518 C2H2 Transcription Factor Family AT5G22480 72.553 0.0 768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02159 07 43737536 43749808 Gma20g00205 20 2294995 2320446 GST