Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00179 ATGCTTGATGAAGTTATAAACTATGTTCAGTCATTGCAACGCCAAGTTGAGTTTCTGTGTATGAAGTTGGCTTTTGTTAACAACAGGCTGGATTTTAGTGTTGAGAGTCTAATGTCAAAAGATATATTGCAATCAATTAATTCTTTGGCACACCCAATATTCCCGATAGATTCCTCAGCACCACCCTTTAATGGGCAACACCCTCACCCAAACCCAACAGTCCACAATAACATTCCTAATGGAACTATGACCCACAACTCAGTGGACCCATTAGATAAAGGTGGCGACACCACTCAAAAGGGCAGGACTTTGGCTACGTGGCAGTGGTGGGAACAACAACTAGGGAGTCGACTTCGGCTTCCTTTTGCGGAGGTCAGGGAAACACAATGTGAGGGTGGTGGGACGGAGTCAACGGCGGGATGA 423 0.4563 MLDEVINYVQSLQRQVEFLCMKLAFVNNRLDFSVESLMSKDILQSINSLAHPIFPIDSSAPPFNGQHPHPNPTVHNNIPNGTMTHNSVDPLDKGGDTTQKGRTLATWQWWEQQLGSRLRLPFAEVRETQCEGGGTESTAG 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00179 140 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 94 IPR024097 GO:0006355
Gma20g00179 140 PANTHER BHLH TRANSCRIPTION FACTOR 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00179 Gma-Chr20 2008398 2010816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00179 1 92 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 50.000 8.19e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00179 - - gmx:100787699 166.777