Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00171 ATGGAGAACATTCTGGGTCTCATCAAACTTCGTATCAAAAGAGGCACTAATCTCAAAGTTTGTGATACTCGTACCTGTGACCCATATGTCTTTGTCACCATGGCCGAACAGAAACTGAAAACTGGTGTTGTGAAAGATAGCATTAATCCAGAGTGGAATGAAGAATTGACACTTTATGTAAGCAATGTTAATATTCCCGTACATCTGACAGTTTCAGACAAAGACACTTTCTCTGTAGATGACAGCATGGGCGATGCAGAGATAGACTTAAAGCCGTATCTTCAGTGTGTGAAGATGGACTTGAGCGATCTTCCTGATAGCCATGTAGTCAAGAGGGTTCAACCAGATAGGACTAACTGCCTTGCTGAAGAGAGCAGCTGCATATGGAAGAATGGAAAACTCATCCAAGAGATGAGTTTAAGATTGAGAAATGTTAAGTCTGGGGAAATAACTGTGGAAATTGAGTGGGTTAATCTTCCAGATTCAAAGGGCTTATCAGAAGTTGAGTTTTAG 513 0.4074 MENILGLIKLRIKRGTNLKVCDTRTCDPYVFVTMAEQKLKTGVVKDSINPEWNEELTLYVSNVNIPVHLTVSDKDTFSVDDSMGDAEIDLKPYLQCVKMDLSDLPDSHVVKRVQPDRTNCLAEESSCIWKNGKLIQEMSLRLRNVKSGEITVEIEWVNLPDSKGLSEVEF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00171 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gma20g00171 170 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 170 - -
Gma20g00171 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 157 IPR035892 -
Gma20g00171 170 Pfam C2 domain 7 92 IPR000008 -
Gma20g00171 170 Gene3D C2 domain 4 164 IPR035892 -
Gma20g00171 170 SMART C2_3c 7 102 IPR000008 -
Gma20g00171 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 170 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00171 Gma-Chr20 1910204 1917130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00171 38 166 C2H2 Transcription Factor Family AT1G70790 54.962 2.08e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00171 - - gmx:100790940 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g02131 07 43240726 43242416 Gma20g00171 20 1910204 1917130 GST