Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00146 ATGAAGCGATTTGCTATGAACAGAAAGATAACAAAAAACCGAAAAGTAAGAGAGGTACGGACACGTGTCCATTTCCGTGATCCACCAAACCGTGACGATAACCCTGTCCCATTCTCTCTCTCCCTGCGACGCTCTCTAAAGCATAAATTCTCTTTATTCCTTGGCTCACTTTCTCCTCACCACCACCATCATTATGTCACCCTTGTAAAAACAAGAACCCTACTTACTCTGAAAGTGGCGAAGATGAGTTTGGGAACCGCTGAGGACGAATCCGGTTCCGAAATCCACATCCCAGCCGAAATCGACTGGCACATGCTGGACAAATCCAAGTTCTTCTTCCTCGGCGCCGCCTTATTCTCCGGCGTGTCATGCGCACTCTACCCCATGGTCGTGTTGAAGACGCGCCAGCAAGTTTCCTCCTCACGCTTCTCCTGCCTCAACATCTCCTGCGCCATTCTCCGCCACGAGGGCCTCCGCGGCTTCTACAAGGGCTTCGGAACCTCCCTCATGGGAACCATCCCCGCACGTGCGCTCTACATGGTCTCCCTCGAGATCACCAAGAGCAACGTCGCCACCGCCTTCCTCCAATTCGGCTTCTCCGAGACCACCGCCGTGGCTGTGGCCAACGCCGCCGCGGGCGTCACCTCCGCCATGGCGGCCCAGCTCGTGTGGACCCCAATTGATGTCGTGAGTCAGCGGCTCATGGTTCAGGGGAGTGGCGGGAGTAAAACCACAGTGCTCGCGAATCTCAATTCGGAAAATTACAGAAGCGGGTTTGATGCTTTTAGGAAAATTATGTGTGCTGATGGAGCGAGAGGGTTTTATAGAGGCTTTGGGATTTCTATATTGACTTATGCGCCTTCCAATGCGGTTTGGTGGACTTCTTATTCCATGGTTCATAGACTCATTTGGGGTGCTTTTGGTGTGCTTTTGGTTCTTACATGGGAAATAACAATGGGGTTGAGTGTTGTTATGGCAAGTGGGGTATCTGCGATTGTGACAATGCCGTTTGATACGATAAAGACGAGGTTGCAGGTGTTGGATCTTCAAGAGGGGAATGGGAGAAGGAGGCCTTTGACTTTTGTTCAGACGGTGAGGAATTTGGTGAAGGAAGGTGGGTTGCTTGCTTGTTACAGAGGATTGGGTCCGAGATGGGCTTCCATGTCCATGTCTGCCACAACTATGATTACTACTTATGAGTTTTTGAAAAGAATGTCTACCAAGAATCAAGAGGATTTGAGTCCACCATAG 1251 0.5068 MKRFAMNRKITKNRKVREVRTRVHFRDPPNRDDNPVPFSLSLRRSLKHKFSLFLGSLSPHHHHHYVTLVKTRTLLTLKVAKMSLGTAEDESGSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSCALYPMVVLKTRQQVSSSRFSCLNISCAILRHEGLRGFYKGFGTSLMGTIPARALYMVSLEITKSNVATAFLQFGFSETTAVAVANAAAGVTSAMAAQLVWTPIDVVSQRLMVQGSGGSKTTVLANLNSENYRSGFDAFRKIMCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGVLLVLTWEITMGLSVVMASGVSAIVTMPFDTIKTRLQVLDLQEGNGRRRPLTFVQTVRNLVKEGGLLACYRGLGPRWASMSMSATTMITTYEFLKRMSTKNQEDLSPP 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00146 416 Pfam Mitochondrial carrier protein 206 304 IPR018108 -
Gma20g00146 416 Pfam Mitochondrial carrier protein 324 409 IPR018108 -
Gma20g00146 416 Pfam Mitochondrial carrier protein 117 190 IPR018108 -
Gma20g00146 416 PRINTS Mitochondrial carrier protein signature 213 235 IPR002067 GO:0055085
Gma20g00146 416 PRINTS Mitochondrial carrier protein signature 162 180 IPR002067 GO:0055085
Gma20g00146 416 PRINTS Mitochondrial carrier protein signature 121 139 IPR002067 GO:0055085
Gma20g00146 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 302 IPR018108 -
Gma20g00146 416 Gene3D Mitochondrial carrier domain 78 305 IPR023395 -
Gma20g00146 416 Gene3D Mitochondrial carrier domain 314 416 IPR023395 -
Gma20g00146 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 189 IPR018108 -
Gma20g00146 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 314 405 IPR018108 -
Gma20g00146 416 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 82 412 - -
Gma20g00146 416 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 82 412 - -
Gma20g00146 416 SUPERFAMILY Mitochondrial carrier 104 402 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00146 Gma-Chr20 1511630 1513322 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g00146 82 411 Chloroplast and Mitochondria Gene Families AT5G26200 63.897 1.91e-153 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00146 K15121 - gmx:100798870 606.29